Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PRPF38BQ5VTL8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRPF38BQ5VTL8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 KRT18P3-201ENST00000451602 1288 ntBASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 AL596442.2-201ENST00000610240 980 ntBASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 IGHV3-41-201ENST00000613121 348 ntBASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 AC079602.3-201ENST00000623931 403 ntBASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.91■□□□□ 0.94
PRPF38BQ5VTL8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 GK-202ENST00000378941 458 ntTSL 3 BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRPF38BQ5VTL8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PRPF38BQ5VTL8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRPF38BQ5VTL8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PRPF38BQ5VTL8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRPF38BQ5VTL8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PRPF38BQ5VTL8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.89■□□□□ 0.94
PRPF38BQ5VTL8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 AC004832.2-201ENST00000426397 482 ntBASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms