Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATPAF1Q5TC12 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
ATPAF1Q5TC12 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATPAF1Q5TC12 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATPAF1Q5TC12 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.7■□□□□ 0.26
ATPAF1Q5TC12 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 KRT16P6-202ENST00000425692 1426 ntBASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.69■□□□□ 0.26
ATPAF1Q5TC12 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 UNC93B5-201ENST00000530315 699 ntBASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.68■□□□□ 0.26
ATPAF1Q5TC12 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 AC009237.14-201ENST00000609975 1594 ntBASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 AC005332.8-201ENST00000622750 2735 ntBASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ATPAF1Q5TC12 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms