Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 IRX1P1-201ENST00000438849 1838 ntBASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 BICD1-207ENST00000551848 1962 ntBASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00242Q5T6M2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 DUX4L16-201ENST00000555130 1264 ntBASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00242Q5T6M2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 CYP2T1P-201ENST00000432607 1285 ntBASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 AC137761.2-201ENST00000561729 223 ntBASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 AC145350.3-201ENST00000569033 163 ntBASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00242Q5T6M2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 AC010980.2-201ENST00000587099 1412 ntBASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 AL133373.2-201ENST00000623187 2828 ntBASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00242Q5T6M2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms