Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 KRT8P8-201ENST00000434750 1448 ntBASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 RPS2P52-201ENST00000469610 820 ntBASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 AC006557.6-201ENST00000623071 864 ntBASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 AC007613.1-201ENST00000572811 2597 ntBASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 AC090164.3-201ENST00000610780 2143 ntBASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RUNDC3AQ59EK9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 AL512353.2-201ENST00000448759 1962 ntBASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 AC080038.1-201ENST00000611274 1154 ntBASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 AC079598.2-202ENST00000546624 1451 ntBASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 AC005082.1-201ENST00000413042 2259 ntBASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RUNDC3AQ59EK9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 YBX1P10-201ENST00000444752 975 ntBASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms