Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 KRT8P41-201ENST00000533985 1514 ntBASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 AL353807.1-201ENST00000427475 662 ntBASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 UBE2SP1-201ENST00000450587 669 ntBASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN20Q4JDL3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 KSR1P1-201ENST00000446298 240 ntBASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 AL161938.1-201ENST00000569833 2180 ntBASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN20Q4JDL3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 AC087289.5-201ENST00000586076 3175 ntBASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN20Q4JDL3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN20Q4JDL3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN20Q4JDL3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN20Q4JDL3 AL049812.1-201ENST00000432563 2267 ntBASIC20.27■□□□□ 0.83
PTPN20Q4JDL3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
PTPN20Q4JDL3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 AC073195.1-201ENST00000607241 877 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms