Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CERKLQ49MI3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CERKLQ49MI3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CERKLQ49MI3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CERKLQ49MI3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.57■■□□□ 1.2
CERKLQ49MI3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CERKLQ49MI3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.56■■□□□ 1.2
CERKLQ49MI3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CERKLQ49MI3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CERKLQ49MI3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CERKLQ49MI3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CERKLQ49MI3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CERKLQ49MI3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CERKLQ49MI3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
CERKLQ49MI3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CERKLQ49MI3 RNF152P1-201ENST00000397754 604 ntBASIC22.56■■□□□ 1.2
CERKLQ49MI3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CERKLQ49MI3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CERKLQ49MI3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.56■■□□□ 1.2
CERKLQ49MI3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CERKLQ49MI3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CERKLQ49MI3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CERKLQ49MI3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.56■■□□□ 1.2
CERKLQ49MI3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CERKLQ49MI3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CERKLQ49MI3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.56■■□□□ 1.2
CERKLQ49MI3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CERKLQ49MI3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CERKLQ49MI3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CERKLQ49MI3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CERKLQ49MI3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.55■■□□□ 1.2
CERKLQ49MI3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CERKLQ49MI3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.55■■□□□ 1.2
CERKLQ49MI3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CERKLQ49MI3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.55■■□□□ 1.2
CERKLQ49MI3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.55■■□□□ 1.2
CERKLQ49MI3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CERKLQ49MI3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CERKLQ49MI3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CERKLQ49MI3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.55■■□□□ 1.2
CERKLQ49MI3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CERKLQ49MI3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CERKLQ49MI3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CERKLQ49MI3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CERKLQ49MI3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CERKLQ49MI3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CERKLQ49MI3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CERKLQ49MI3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CERKLQ49MI3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CERKLQ49MI3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CERKLQ49MI3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CERKLQ49MI3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.54■■□□□ 1.2
CERKLQ49MI3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CERKLQ49MI3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CERKLQ49MI3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.54■■□□□ 1.2
CERKLQ49MI3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CERKLQ49MI3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CERKLQ49MI3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CERKLQ49MI3 TSPY5P-201ENST00000426936 936 ntBASIC22.54■■□□□ 1.2
CERKLQ49MI3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.54■■□□□ 1.2
CERKLQ49MI3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.54■■□□□ 1.2
CERKLQ49MI3 LINC01238-205ENST00000567549 1107 ntBASIC22.54■■□□□ 1.2
CERKLQ49MI3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.54■■□□□ 1.2
CERKLQ49MI3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CERKLQ49MI3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CERKLQ49MI3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CERKLQ49MI3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.54■■□□□ 1.2
CERKLQ49MI3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CERKLQ49MI3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CERKLQ49MI3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.54■■□□□ 1.2
CERKLQ49MI3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CERKLQ49MI3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CERKLQ49MI3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CERKLQ49MI3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CERKLQ49MI3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CERKLQ49MI3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.53■■□□□ 1.2
CERKLQ49MI3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CERKLQ49MI3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
CERKLQ49MI3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CERKLQ49MI3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CERKLQ49MI3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CERKLQ49MI3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.53■■□□□ 1.2
CERKLQ49MI3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.53■■□□□ 1.2
CERKLQ49MI3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.53■■□□□ 1.2
CERKLQ49MI3 AC011558.1-201ENST00000623459 338 ntBASIC22.53■■□□□ 1.2
CERKLQ49MI3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CERKLQ49MI3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.53■■□□□ 1.2
CERKLQ49MI3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.53■■□□□ 1.2
CERKLQ49MI3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CERKLQ49MI3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.53■■□□□ 1.2
CERKLQ49MI3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CERKLQ49MI3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CERKLQ49MI3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.52■■□□□ 1.2
CERKLQ49MI3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CERKLQ49MI3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CERKLQ49MI3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CERKLQ49MI3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CERKLQ49MI3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.52■■□□□ 1.2
CERKLQ49MI3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CERKLQ49MI3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms