Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.06■□□□□ 0.8
EFEMP1Q12805 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.06■□□□□ 0.8
EFEMP1Q12805 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
EFEMP1Q12805 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
EFEMP1Q12805 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.06■□□□□ 0.8
EFEMP1Q12805 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EFEMP1Q12805 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EFEMP1Q12805 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFEMP1Q12805 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
EFEMP1Q12805 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EFEMP1Q12805 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFEMP1Q12805 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.05■□□□□ 0.8
EFEMP1Q12805 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.05■□□□□ 0.8
EFEMP1Q12805 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
EFEMP1Q12805 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.05■□□□□ 0.8
EFEMP1Q12805 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.05■□□□□ 0.8
EFEMP1Q12805 AP005242.2-201ENST00000580065 1175 ntBASIC20.05■□□□□ 0.8
EFEMP1Q12805 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
EFEMP1Q12805 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFEMP1Q12805 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFEMP1Q12805 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFEMP1Q12805 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFEMP1Q12805 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFEMP1Q12805 AL158211.5-201ENST00000623583 2518 ntBASIC20.05■□□□□ 0.8
EFEMP1Q12805 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFEMP1Q12805 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFEMP1Q12805 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFEMP1Q12805 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFEMP1Q12805 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFEMP1Q12805 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFEMP1Q12805 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFEMP1Q12805 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EFEMP1Q12805 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFEMP1Q12805 SDHAP1-207ENST00000440850 2000 ntBASIC20.04■□□□□ 0.8
EFEMP1Q12805 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFEMP1Q12805 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EFEMP1Q12805 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 MFAP1P1-201ENST00000442257 1255 ntBASIC20.04■□□□□ 0.8
EFEMP1Q12805 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 NAPSB-206ENST00000562112 1266 ntBASIC20.04■□□□□ 0.8
EFEMP1Q12805 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EFEMP1Q12805 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.04■□□□□ 0.8
EFEMP1Q12805 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFEMP1Q12805 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFEMP1Q12805 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFEMP1Q12805 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFEMP1Q12805 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFEMP1Q12805 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFEMP1Q12805 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFEMP1Q12805 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFEMP1Q12805 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EFEMP1Q12805 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
EFEMP1Q12805 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFEMP1Q12805 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.03■□□□□ 0.8
EFEMP1Q12805 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EFEMP1Q12805 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.03■□□□□ 0.8
EFEMP1Q12805 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.03■□□□□ 0.8
EFEMP1Q12805 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.03■□□□□ 0.8
EFEMP1Q12805 AC010947.1-201ENST00000623454 693 ntBASIC20.03■□□□□ 0.8
EFEMP1Q12805 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFEMP1Q12805 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EFEMP1Q12805 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
EFEMP1Q12805 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EFEMP1Q12805 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.03■□□□□ 0.8
EFEMP1Q12805 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.02■□□□□ 0.8
EFEMP1Q12805 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFEMP1Q12805 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFEMP1Q12805 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFEMP1Q12805 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFEMP1Q12805 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EFEMP1Q12805 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFEMP1Q12805 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFEMP1Q12805 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.02■□□□□ 0.8
EFEMP1Q12805 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.02■□□□□ 0.8
EFEMP1Q12805 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
EFEMP1Q12805 AC012306.2-201ENST00000609350 630 ntBASIC20.02■□□□□ 0.8
EFEMP1Q12805 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.02■□□□□ 0.8
EFEMP1Q12805 AC097493.4-201ENST00000641197 219 ntBASIC20.02■□□□□ 0.8
EFEMP1Q12805 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFEMP1Q12805 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.02■□□□□ 0.8
EFEMP1Q12805 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EFEMP1Q12805 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
EFEMP1Q12805 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.02■□□□□ 0.79
EFEMP1Q12805 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EFEMP1Q12805 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EFEMP1Q12805 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
EFEMP1Q12805 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms