Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF140P52738 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF140P52738 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF140P52738 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ZNF140P52738 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF140P52738 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF140P52738 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.2■□□□□ 0.66
ZNF140P52738 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.2■□□□□ 0.66
ZNF140P52738 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF140P52738 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF140P52738 AC073195.1-201ENST00000607241 877 ntBASIC19.2■□□□□ 0.66
ZNF140P52738 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.2■□□□□ 0.66
ZNF140P52738 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF140P52738 AL161938.1-201ENST00000569833 2180 ntBASIC19.2■□□□□ 0.66
ZNF140P52738 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF140P52738 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 KRT16P1-201ENST00000399124 1418 ntBASIC19.19■□□□□ 0.66
ZNF140P52738 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.19■□□□□ 0.66
ZNF140P52738 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF140P52738 AC131212.4-201ENST00000623606 975 ntBASIC19.19■□□□□ 0.66
ZNF140P52738 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF140P52738 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF140P52738 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF140P52738 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF140P52738 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.19■□□□□ 0.66
ZNF140P52738 BX323043.1-201ENST00000641006 1765 ntBASIC19.19■□□□□ 0.66
ZNF140P52738 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF140P52738 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ZNF140P52738 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZNF140P52738 AL135905.2-201ENST00000584934 1404 ntBASIC19.18■□□□□ 0.66
ZNF140P52738 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF140P52738 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF140P52738 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ZNF140P52738 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ZNF140P52738 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZNF140P52738 AC018445.3-201ENST00000624177 1945 ntBASIC19.18■□□□□ 0.66
ZNF140P52738 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ZNF140P52738 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZNF140P52738 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF140P52738 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ZNF140P52738 TSPY23P-201ENST00000440136 739 ntBASIC19.18■□□□□ 0.66
ZNF140P52738 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF140P52738 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF140P52738 AC026271.3-201ENST00000571884 352 ntBASIC19.18■□□□□ 0.66
ZNF140P52738 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF140P52738 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF140P52738 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF140P52738 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF140P52738 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF140P52738 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF140P52738 IRX1P1-201ENST00000438849 1838 ntBASIC19.18■□□□□ 0.66
ZNF140P52738 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF140P52738 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF140P52738 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
ZNF140P52738 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ZNF140P52738 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF140P52738 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF140P52738 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF140P52738 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ZNF140P52738 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ZNF140P52738 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF140P52738 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
ZNF140P52738 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF140P52738 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF140P52738 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF140P52738 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF140P52738 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
ZNF140P52738 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF140P52738 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.17■□□□□ 0.66
ZNF140P52738 AC012618.2-201ENST00000428058 849 ntBASIC19.17■□□□□ 0.66
ZNF140P52738 TSPY21P-201ENST00000433481 731 ntBASIC19.17■□□□□ 0.66
ZNF140P52738 CR392000.1-201ENST00000624770 1228 ntBASIC19.17■□□□□ 0.66
ZNF140P52738 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF140P52738 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF140P52738 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF140P52738 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
ZNF140P52738 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF140P52738 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF140P52738 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF140P52738 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF140P52738 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ZNF140P52738 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF140P52738 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF140P52738 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF140P52738 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms