Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCN4P51793 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN4P51793 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN4P51793 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CLCN4P51793 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN4P51793 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CLCN4P51793 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CLCN4P51793 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN4P51793 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN4P51793 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN4P51793 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.29■□□□□ 0.84
CLCN4P51793 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN4P51793 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN4P51793 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN4P51793 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.29■□□□□ 0.84
CLCN4P51793 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN4P51793 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.29■□□□□ 0.84
CLCN4P51793 KRT18P48-201ENST00000434763 852 ntBASIC20.29■□□□□ 0.84
CLCN4P51793 AC093458.2-201ENST00000623150 629 ntBASIC20.29■□□□□ 0.84
CLCN4P51793 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CLCN4P51793 LINC01006-201ENST00000333319 2292 ntBASIC20.29■□□□□ 0.84
CLCN4P51793 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN4P51793 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN4P51793 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLCN4P51793 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN4P51793 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN4P51793 AL691432.2-201ENST00000607222 2038 ntBASIC20.29■□□□□ 0.84
CLCN4P51793 AC009237.14-201ENST00000609975 1594 ntBASIC20.29■□□□□ 0.84
CLCN4P51793 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN4P51793 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN4P51793 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN4P51793 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.28■□□□□ 0.84
CLCN4P51793 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLCN4P51793 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.28■□□□□ 0.84
CLCN4P51793 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCN4P51793 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN4P51793 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN4P51793 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCN4P51793 AP000523.1-201ENST00000398242 1049 ntBASIC20.28■□□□□ 0.84
CLCN4P51793 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CLCN4P51793 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.28■□□□□ 0.84
CLCN4P51793 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.28■□□□□ 0.84
CLCN4P51793 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLCN4P51793 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLCN4P51793 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN4P51793 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.28■□□□□ 0.84
CLCN4P51793 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN4P51793 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN4P51793 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN4P51793 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN4P51793 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN4P51793 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN4P51793 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CLCN4P51793 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CLCN4P51793 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CLCN4P51793 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN4P51793 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.27■□□□□ 0.84
CLCN4P51793 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.27■□□□□ 0.84
CLCN4P51793 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
CLCN4P51793 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN4P51793 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN4P51793 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.27■□□□□ 0.84
CLCN4P51793 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CLCN4P51793 AL121894.2-201ENST00000602977 491 ntBASIC20.27■□□□□ 0.84
CLCN4P51793 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN4P51793 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.27■□□□□ 0.84
CLCN4P51793 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.27■□□□□ 0.83
CLCN4P51793 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLCN4P51793 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CLCN4P51793 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.26■□□□□ 0.83
CLCN4P51793 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN4P51793 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
CLCN4P51793 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN4P51793 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN4P51793 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN4P51793 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN4P51793 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN4P51793 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN4P51793 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLCN4P51793 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.26■□□□□ 0.83
CLCN4P51793 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.26■□□□□ 0.83
CLCN4P51793 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.26■□□□□ 0.83
CLCN4P51793 NEK4P2-201ENST00000580004 1012 ntBASIC20.26■□□□□ 0.83
CLCN4P51793 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CLCN4P51793 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.26■□□□□ 0.83
CLCN4P51793 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN4P51793 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN4P51793 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN4P51793 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN4P51793 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCN4P51793 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN4P51793 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLCN4P51793 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLCN4P51793 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.25■□□□□ 0.83
CLCN4P51793 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCN4P51793 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN4P51793 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN4P51793 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.25■□□□□ 0.83
CLCN4P51793 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.25■□□□□ 0.83
CLCN4P51793 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms