Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDK7P50613 AL691432.3-201ENST00000621860 400 ntBASIC21.31■■□□□ 1
CDK7P50613 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDK7P50613 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDK7P50613 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDK7P50613 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDK7P50613 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDK7P50613 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDK7P50613 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDK7P50613 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CDK7P50613 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.3■■□□□ 1
CDK7P50613 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDK7P50613 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDK7P50613 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
CDK7P50613 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.3■■□□□ 1
CDK7P50613 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.3■■□□□ 1
CDK7P50613 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDK7P50613 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.3■■□□□ 1
CDK7P50613 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDK7P50613 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDK7P50613 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDK7P50613 KRT8P11-201ENST00000409686 1436 ntBASIC21.29■■□□□ 1
CDK7P50613 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.29■■□□□ 1
CDK7P50613 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CDK7P50613 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
CDK7P50613 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDK7P50613 FEM1AP1-201ENST00000431297 1995 ntBASIC21.29■■□□□ 1
CDK7P50613 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDK7P50613 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDK7P50613 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.29■■□□□ 1
CDK7P50613 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.29■■□□□ 1
CDK7P50613 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.29■■□□□ 1
CDK7P50613 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDK7P50613 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDK7P50613 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CDK7P50613 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDK7P50613 NPAP1P7-201ENST00000613027 823 ntBASIC21.29■■□□□ 1
CDK7P50613 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDK7P50613 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CDK7P50613 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDK7P50613 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.29■■□□□ 1
CDK7P50613 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CDK7P50613 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDK7P50613 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDK7P50613 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CDK7P50613 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.28■■□□□ 1
CDK7P50613 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDK7P50613 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CDK7P50613 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.28■■□□□ 1
CDK7P50613 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDK7P50613 SPDYE15P-201ENST00000424157 909 ntBASIC21.28■■□□□ 1
CDK7P50613 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.28■■□□□ 1
CDK7P50613 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDK7P50613 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.28■■□□□ 1
CDK7P50613 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.28■■□□□ 1
CDK7P50613 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDK7P50613 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.28■■□□□ 1
CDK7P50613 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.28■■□□□ 1
CDK7P50613 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.28■■□□□ 1
CDK7P50613 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.28■■□□□ 1
CDK7P50613 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.28■■□□□ 1
CDK7P50613 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDK7P50613 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDK7P50613 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDK7P50613 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CDK7P50613 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDK7P50613 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CDK7P50613 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDK7P50613 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDK7P50613 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDK7P50613 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDK7P50613 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDK7P50613 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CDK7P50613 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.27■■□□□ 1
CDK7P50613 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.27■■□□□ 1
CDK7P50613 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.27■■□□□ 1
CDK7P50613 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDK7P50613 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDK7P50613 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.27■■□□□ 1
CDK7P50613 TSPY21P-201ENST00000433481 731 ntBASIC21.27■■□□□ 1
CDK7P50613 TSPY23P-201ENST00000440136 739 ntBASIC21.27■■□□□ 1
CDK7P50613 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.27■■□□□ 1
CDK7P50613 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.27■■□□□ 1
CDK7P50613 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.27■■□□□ 1
CDK7P50613 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.27■■□□□ 1
CDK7P50613 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDK7P50613 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDK7P50613 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CDK7P50613 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CDK7P50613 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.27■□□□□ 0.99
CDK7P50613 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.27■□□□□ 0.99
CDK7P50613 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDK7P50613 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.27■□□□□ 0.99
CDK7P50613 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK7P50613 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
CDK7P50613 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDK7P50613 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDK7P50613 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.26■□□□□ 0.99
CDK7P50613 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
CDK7P50613 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms