Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT6CP48668 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT6CP48668 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT6CP48668 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT6CP48668 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
KRT6CP48668 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT6CP48668 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT6CP48668 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT6CP48668 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 AC004408.2-201ENST00000623613 2777 ntBASIC18.66■□□□□ 0.58
KRT6CP48668 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT6CP48668 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT6CP48668 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 AC104417.2-201ENST00000562989 1793 ntBASIC18.66■□□□□ 0.58
KRT6CP48668 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
KRT6CP48668 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT6CP48668 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT6CP48668 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT6CP48668 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT6CP48668 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT6CP48668 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT6CP48668 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
KRT6CP48668 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KRT6CP48668 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT6CP48668 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT6CP48668 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT6CP48668 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KRT6CP48668 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT6CP48668 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT6CP48668 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
KRT6CP48668 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT6CP48668 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.65■□□□□ 0.58
KRT6CP48668 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT6CP48668 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KRT6CP48668 UNC93B4-201ENST00000505679 747 ntBASIC18.65■□□□□ 0.58
KRT6CP48668 AC090192.1-201ENST00000517740 490 ntBASIC18.65■□□□□ 0.58
KRT6CP48668 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT6CP48668 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT6CP48668 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT6CP48668 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT6CP48668 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
KRT6CP48668 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT6CP48668 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT6CP48668 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
KRT6CP48668 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
KRT6CP48668 AC020763.4-201ENST00000623414 4170 ntBASIC18.64■□□□□ 0.58
KRT6CP48668 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
KRT6CP48668 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT6CP48668 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT6CP48668 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.64■□□□□ 0.57
KRT6CP48668 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
KRT6CP48668 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6CP48668 AL161938.1-201ENST00000569833 2180 ntBASIC18.64■□□□□ 0.57
KRT6CP48668 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6CP48668 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6CP48668 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6CP48668 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6CP48668 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT6CP48668 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT6CP48668 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT6CP48668 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
KRT6CP48668 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT6CP48668 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.64■□□□□ 0.57
KRT6CP48668 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
KRT6CP48668 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT6CP48668 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6CP48668 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT6CP48668 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
KRT6CP48668 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms