Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MMP13P45452 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MMP13P45452 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
MMP13P45452 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
MMP13P45452 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
MMP13P45452 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MMP13P45452 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MMP13P45452 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
MMP13P45452 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MMP13P45452 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
MMP13P45452 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
MMP13P45452 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.02■□□□□ 0.8
MMP13P45452 MTDHP1-201ENST00000605323 784 ntBASIC20.02■□□□□ 0.8
MMP13P45452 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MMP13P45452 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
MMP13P45452 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
MMP13P45452 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MMP13P45452 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
MMP13P45452 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
MMP13P45452 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
MMP13P45452 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
MMP13P45452 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.02■□□□□ 0.79
MMP13P45452 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
MMP13P45452 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP13P45452 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP13P45452 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP13P45452 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP13P45452 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP13P45452 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP13P45452 AC128676.1-201ENST00000454392 318 ntBASIC20.01■□□□□ 0.79
MMP13P45452 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.01■□□□□ 0.79
MMP13P45452 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.01■□□□□ 0.79
MMP13P45452 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP13P45452 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP13P45452 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP13P45452 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
MMP13P45452 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MMP13P45452 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
MMP13P45452 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP13P45452 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP13P45452 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.01■□□□□ 0.79
MMP13P45452 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
MMP13P45452 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.01■□□□□ 0.79
MMP13P45452 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
MMP13P45452 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP13P45452 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.01■□□□□ 0.79
MMP13P45452 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
MMP13P45452 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.01■□□□□ 0.79
MMP13P45452 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20■□□□□ 0.79
MMP13P45452 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP13P45452 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP13P45452 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20■□□□□ 0.79
MMP13P45452 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
MMP13P45452 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MMP13P45452 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP13P45452 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP13P45452 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
MMP13P45452 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20■□□□□ 0.79
MMP13P45452 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
MMP13P45452 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20■□□□□ 0.79
MMP13P45452 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP13P45452 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP13P45452 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20■□□□□ 0.79
MMP13P45452 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
MMP13P45452 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
MMP13P45452 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
MMP13P45452 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20■□□□□ 0.79
MMP13P45452 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MMP13P45452 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
MMP13P45452 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
MMP13P45452 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
MMP13P45452 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
MMP13P45452 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.99■□□□□ 0.79
MMP13P45452 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.99■□□□□ 0.79
MMP13P45452 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
MMP13P45452 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.99■□□□□ 0.79
MMP13P45452 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.99■□□□□ 0.79
MMP13P45452 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.99■□□□□ 0.79
MMP13P45452 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
MMP13P45452 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.99■□□□□ 0.79
MMP13P45452 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.99■□□□□ 0.79
MMP13P45452 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.99■□□□□ 0.79
MMP13P45452 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
MMP13P45452 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MMP13P45452 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms