Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AP000523.1-201ENST00000398242 1049 ntBASIC24.48■■□□□ 1.51
COL15A1P39059 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.48■■□□□ 1.51
COL15A1P39059 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC24.48■■□□□ 1.51
COL15A1P39059 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL15A1P39059 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC24.48■■□□□ 1.51
COL15A1P39059 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL15A1P39059 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL15A1P39059 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC24.47■■□□□ 1.51
COL15A1P39059 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL15A1P39059 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL15A1P39059 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
COL15A1P39059 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL15A1P39059 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL15A1P39059 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
COL15A1P39059 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
COL15A1P39059 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
COL15A1P39059 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL15A1P39059 PHB2-202ENST00000440277 996 ntTSL 5 BASIC24.47■■□□□ 1.51
COL15A1P39059 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC24.47■■□□□ 1.51
COL15A1P39059 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC24.47■■□□□ 1.51
COL15A1P39059 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
COL15A1P39059 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL15A1P39059 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL15A1P39059 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
COL15A1P39059 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
COL15A1P39059 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.46■■□□□ 1.51
COL15A1P39059 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC24.46■■□□□ 1.51
COL15A1P39059 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COL15A1P39059 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC24.46■■□□□ 1.51
COL15A1P39059 AL450487.1-201ENST00000426799 995 ntBASIC24.46■■□□□ 1.51
COL15A1P39059 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC24.46■■□□□ 1.51
COL15A1P39059 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.46■■□□□ 1.51
COL15A1P39059 AL136038.3-201ENST00000561909 1096 ntBASIC24.46■■□□□ 1.51
COL15A1P39059 NEK4P2-201ENST00000580004 1012 ntBASIC24.46■■□□□ 1.51
COL15A1P39059 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL15A1P39059 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.46■■□□□ 1.51
COL15A1P39059 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL15A1P39059 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL15A1P39059 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL15A1P39059 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
COL15A1P39059 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL15A1P39059 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COL15A1P39059 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
COL15A1P39059 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.51
COL15A1P39059 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
COL15A1P39059 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
COL15A1P39059 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL15A1P39059 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
COL15A1P39059 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC24.45■■□□□ 1.5
COL15A1P39059 CLEC4GP1-201ENST00000596555 870 ntBASIC24.45■■□□□ 1.5
COL15A1P39059 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC24.45■■□□□ 1.5
COL15A1P39059 HYMAI.1-201ENST00000620949 238 ntBASIC24.45■■□□□ 1.5
COL15A1P39059 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.45■■□□□ 1.5
COL15A1P39059 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL15A1P39059 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.45■■□□□ 1.5
COL15A1P39059 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC24.45■■□□□ 1.5
COL15A1P39059 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL15A1P39059 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL15A1P39059 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
COL15A1P39059 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.5
COL15A1P39059 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC24.45■■□□□ 1.5
COL15A1P39059 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL15A1P39059 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL15A1P39059 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL15A1P39059 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL15A1P39059 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL15A1P39059 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL15A1P39059 SPDYE15P-201ENST00000424157 909 ntBASIC24.44■■□□□ 1.5
COL15A1P39059 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC24.44■■□□□ 1.5
COL15A1P39059 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC24.44■■□□□ 1.5
COL15A1P39059 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC24.44■■□□□ 1.5
COL15A1P39059 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.44■■□□□ 1.5
COL15A1P39059 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL15A1P39059 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
COL15A1P39059 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC24.44■■□□□ 1.5
COL15A1P39059 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COL15A1P39059 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL15A1P39059 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
COL15A1P39059 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
COL15A1P39059 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
COL15A1P39059 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
COL15A1P39059 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL15A1P39059 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL15A1P39059 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL15A1P39059 STARP1-201ENST00000397973 869 ntBASIC24.43■■□□□ 1.5
COL15A1P39059 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC24.43■■□□□ 1.5
COL15A1P39059 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL15A1P39059 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
COL15A1P39059 ZNF444P1-201ENST00000559497 298 ntBASIC24.43■■□□□ 1.5
COL15A1P39059 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC24.43■■□□□ 1.5
COL15A1P39059 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL15A1P39059 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
COL15A1P39059 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
COL15A1P39059 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL15A1P39059 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC24.43■■□□□ 1.5
COL15A1P39059 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL15A1P39059 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC24.43■■□□□ 1.5
COL15A1P39059 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC24.43■■□□□ 1.5
COL15A1P39059 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms