Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP8P22894 KRT18P29-201ENST00000397031 1267 ntBASIC20.28■□□□□ 0.84
MMP8P22894 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.28■□□□□ 0.84
MMP8P22894 NIFKP9-201ENST00000419265 221 ntBASIC20.28■□□□□ 0.84
MMP8P22894 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MMP8P22894 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
MMP8P22894 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP8P22894 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.28■□□□□ 0.84
MMP8P22894 AL353708.3-201ENST00000610272 989 ntBASIC20.28■□□□□ 0.84
MMP8P22894 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
MMP8P22894 AL445675.2-201ENST00000620291 557 ntBASIC20.28■□□□□ 0.84
MMP8P22894 AL359736.2-201ENST00000621992 437 ntBASIC20.28■□□□□ 0.84
MMP8P22894 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP8P22894 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.28■□□□□ 0.84
MMP8P22894 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
MMP8P22894 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MMP8P22894 HTR7P1-201ENST00000538670 1336 ntBASIC20.27■□□□□ 0.84
MMP8P22894 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MMP8P22894 KRT8P41-201ENST00000533985 1514 ntBASIC20.27■□□□□ 0.84
MMP8P22894 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP8P22894 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
MMP8P22894 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MMP8P22894 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.27■□□□□ 0.84
MMP8P22894 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.27■□□□□ 0.84
MMP8P22894 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP8P22894 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MMP8P22894 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP8P22894 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP8P22894 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.27■□□□□ 0.84
MMP8P22894 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MMP8P22894 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP8P22894 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.27■□□□□ 0.84
MMP8P22894 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP8P22894 PRORSD1P-201ENST00000295112 541 ntBASIC20.27■□□□□ 0.84
MMP8P22894 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MMP8P22894 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MMP8P22894 Z85996.1-201ENST00000494644 937 ntBASIC20.27■□□□□ 0.84
MMP8P22894 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.27■□□□□ 0.84
MMP8P22894 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
MMP8P22894 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
MMP8P22894 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.27■□□□□ 0.84
MMP8P22894 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.27■□□□□ 0.84
MMP8P22894 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.27■□□□□ 0.84
MMP8P22894 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP8P22894 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MMP8P22894 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP8P22894 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MMP8P22894 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MMP8P22894 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.27■□□□□ 0.83
MMP8P22894 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MMP8P22894 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.26■□□□□ 0.83
MMP8P22894 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
MMP8P22894 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.26■□□□□ 0.83
MMP8P22894 FP475955.4-201ENST00000623131 1990 ntBASIC20.26■□□□□ 0.83
MMP8P22894 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP8P22894 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
MMP8P22894 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP8P22894 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
MMP8P22894 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MMP8P22894 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.26■□□□□ 0.83
MMP8P22894 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MMP8P22894 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP8P22894 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.26■□□□□ 0.83
MMP8P22894 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MMP8P22894 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.26■□□□□ 0.83
MMP8P22894 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.26■□□□□ 0.83
MMP8P22894 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP8P22894 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.26■□□□□ 0.83
MMP8P22894 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP8P22894 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP8P22894 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
MMP8P22894 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP8P22894 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP8P22894 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.26■□□□□ 0.83
MMP8P22894 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MMP8P22894 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.26■□□□□ 0.83
MMP8P22894 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.25■□□□□ 0.83
MMP8P22894 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MMP8P22894 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.25■□□□□ 0.83
MMP8P22894 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MMP8P22894 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP8P22894 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP8P22894 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MMP8P22894 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
MMP8P22894 TSPY21P-201ENST00000433481 731 ntBASIC20.25■□□□□ 0.83
MMP8P22894 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.25■□□□□ 0.83
MMP8P22894 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
MMP8P22894 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.25■□□□□ 0.83
MMP8P22894 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.25■□□□□ 0.83
MMP8P22894 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.25■□□□□ 0.83
MMP8P22894 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.25■□□□□ 0.83
MMP8P22894 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP8P22894 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP8P22894 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
MMP8P22894 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MMP8P22894 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP8P22894 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.25■□□□□ 0.83
MMP8P22894 FEM1AP3-201ENST00000403722 1741 ntBASIC20.24■□□□□ 0.83
MMP8P22894 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.24■□□□□ 0.83
MMP8P22894 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms