Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
NFKB1P19838 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NFKB1P19838 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NFKB1P19838 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NFKB1P19838 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NFKB1P19838 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NFKB1P19838 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NFKB1P19838 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
NFKB1P19838 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NFKB1P19838 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NFKB1P19838 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NFKB1P19838 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NFKB1P19838 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.6■□□□□ 0.73
NFKB1P19838 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.6■□□□□ 0.73
NFKB1P19838 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.6■□□□□ 0.73
NFKB1P19838 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NFKB1P19838 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.6■□□□□ 0.73
NFKB1P19838 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NFKB1P19838 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.6■□□□□ 0.73
NFKB1P19838 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.6■□□□□ 0.73
NFKB1P19838 AL161938.1-201ENST00000569833 2180 ntBASIC19.6■□□□□ 0.73
NFKB1P19838 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NFKB1P19838 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NFKB1P19838 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NFKB1P19838 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NFKB1P19838 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NFKB1P19838 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NFKB1P19838 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NFKB1P19838 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NFKB1P19838 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.59■□□□□ 0.73
NFKB1P19838 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NFKB1P19838 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NFKB1P19838 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NFKB1P19838 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NFKB1P19838 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NFKB1P19838 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.59■□□□□ 0.73
NFKB1P19838 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NFKB1P19838 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NFKB1P19838 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NFKB1P19838 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NFKB1P19838 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.59■□□□□ 0.73
NFKB1P19838 RPPH1-201ENST00000516869 333 ntBASIC19.59■□□□□ 0.73
NFKB1P19838 ITM2C-210ENST00000620962 501 ntBASIC19.59■□□□□ 0.73
NFKB1P19838 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NFKB1P19838 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NFKB1P19838 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NFKB1P19838 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NFKB1P19838 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NFKB1P19838 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NFKB1P19838 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NFKB1P19838 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
NFKB1P19838 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.58■□□□□ 0.73
NFKB1P19838 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NFKB1P19838 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NFKB1P19838 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NFKB1P19838 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
NFKB1P19838 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
NFKB1P19838 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
NFKB1P19838 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.73
NFKB1P19838 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.58■□□□□ 0.72
NFKB1P19838 KRT18P29-201ENST00000397031 1267 ntBASIC19.58■□□□□ 0.72
NFKB1P19838 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NFKB1P19838 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NFKB1P19838 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NFKB1P19838 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.58■□□□□ 0.72
NFKB1P19838 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.58■□□□□ 0.72
NFKB1P19838 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.58■□□□□ 0.72
NFKB1P19838 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.58■□□□□ 0.72
NFKB1P19838 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NFKB1P19838 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
NFKB1P19838 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NFKB1P19838 AL049812.1-201ENST00000432563 2267 ntBASIC19.58■□□□□ 0.72
NFKB1P19838 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NFKB1P19838 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
NFKB1P19838 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFKB1P19838 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NFKB1P19838 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFKB1P19838 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NFKB1P19838 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NFKB1P19838 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NFKB1P19838 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.57■□□□□ 0.72
NFKB1P19838 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFKB1P19838 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFKB1P19838 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NFKB1P19838 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.57■□□□□ 0.72
NFKB1P19838 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.57■□□□□ 0.72
NFKB1P19838 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.57■□□□□ 0.72
NFKB1P19838 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.57■□□□□ 0.72
NFKB1P19838 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.57■□□□□ 0.72
NFKB1P19838 AL160286.2-201ENST00000567150 934 ntBASIC19.57■□□□□ 0.72
NFKB1P19838 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.57■□□□□ 0.72
NFKB1P19838 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.57■□□□□ 0.72
NFKB1P19838 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.57■□□□□ 0.72
NFKB1P19838 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFKB1P19838 AC120498.9-201ENST00000339021 3867 ntBASIC19.57■□□□□ 0.72
NFKB1P19838 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NFKB1P19838 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NFKB1P19838 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
NFKB1P19838 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NFKB1P19838 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms