Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.68■□□□□ 0.9
CD58P19256 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD58P19256 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CD58P19256 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CD58P19256 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.68■□□□□ 0.9
CD58P19256 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CD58P19256 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.68■□□□□ 0.9
CD58P19256 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CD58P19256 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD58P19256 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD58P19256 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD58P19256 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CD58P19256 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD58P19256 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD58P19256 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.68■□□□□ 0.9
CD58P19256 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.68■□□□□ 0.9
CD58P19256 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD58P19256 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.68■□□□□ 0.9
CD58P19256 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.68■□□□□ 0.9
CD58P19256 AL353708.3-201ENST00000610272 989 ntBASIC20.68■□□□□ 0.9
CD58P19256 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.68■□□□□ 0.9
CD58P19256 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD58P19256 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.68■□□□□ 0.9
CD58P19256 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.68■□□□□ 0.9
CD58P19256 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.68■□□□□ 0.9
CD58P19256 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CD58P19256 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 AC087289.5-201ENST00000586076 3175 ntBASIC20.67■□□□□ 0.9
CD58P19256 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.67■□□□□ 0.9
CD58P19256 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 FAM197Y1-201ENST00000421178 764 ntBASIC20.67■□□□□ 0.9
CD58P19256 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CD58P19256 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.67■□□□□ 0.9
CD58P19256 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 AC073195.1-201ENST00000607241 877 ntBASIC20.67■□□□□ 0.9
CD58P19256 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD58P19256 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CD58P19256 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CD58P19256 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.67■□□□□ 0.9
CD58P19256 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CD58P19256 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.67■□□□□ 0.9
CD58P19256 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD58P19256 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD58P19256 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD58P19256 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD58P19256 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CD58P19256 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.66■□□□□ 0.9
CD58P19256 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.66■□□□□ 0.9
CD58P19256 KSR1P1-201ENST00000446298 240 ntBASIC20.66■□□□□ 0.9
CD58P19256 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.66■□□□□ 0.9
CD58P19256 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.66■□□□□ 0.9
CD58P19256 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.66■□□□□ 0.9
CD58P19256 AL160286.2-201ENST00000567150 934 ntBASIC20.66■□□□□ 0.9
CD58P19256 AC233702.5-201ENST00000584107 538 ntBASIC20.66■□□□□ 0.9
CD58P19256 AL445675.2-201ENST00000620291 557 ntBASIC20.66■□□□□ 0.9
CD58P19256 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD58P19256 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD58P19256 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD58P19256 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.66■□□□□ 0.9
CD58P19256 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD58P19256 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.66■□□□□ 0.9
CD58P19256 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CD58P19256 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.66■□□□□ 0.9
CD58P19256 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD58P19256 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CD58P19256 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD58P19256 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD58P19256 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.66■□□□□ 0.9
CD58P19256 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CD58P19256 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CD58P19256 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD58P19256 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD58P19256 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.65■□□□□ 0.9
CD58P19256 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CD58P19256 AL032819.2-201ENST00000624543 2162 ntBASIC20.65■□□□□ 0.9
CD58P19256 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.65■□□□□ 0.9
CD58P19256 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD58P19256 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD58P19256 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CD58P19256 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD58P19256 KRT16P1-201ENST00000399124 1418 ntBASIC20.65■□□□□ 0.9
CD58P19256 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD58P19256 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD58P19256 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CD58P19256 AC012618.2-201ENST00000428058 849 ntBASIC20.65■□□□□ 0.9
CD58P19256 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD58P19256 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD58P19256 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.65■□□□□ 0.9
CD58P19256 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms