Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCK1P16333 CYP2T1P-201ENST00000432607 1285 ntBASIC18.2■□□□□ 0.5
NCK1P16333 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.2■□□□□ 0.5
NCK1P16333 DUX4L16-201ENST00000555130 1264 ntBASIC18.2■□□□□ 0.5
NCK1P16333 AC137761.2-201ENST00000561729 223 ntBASIC18.2■□□□□ 0.5
NCK1P16333 AC145350.3-201ENST00000569033 163 ntBASIC18.2■□□□□ 0.5
NCK1P16333 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.2■□□□□ 0.5
NCK1P16333 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.2■□□□□ 0.5
NCK1P16333 AC011767.1-201ENST00000617410 1153 ntBASIC18.2■□□□□ 0.5
NCK1P16333 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCK1P16333 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCK1P16333 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NCK1P16333 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.2■□□□□ 0.5
NCK1P16333 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NCK1P16333 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCK1P16333 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCK1P16333 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.19■□□□□ 0.5
NCK1P16333 Z98044.1-201ENST00000632503 1764 ntBASIC18.19■□□□□ 0.5
NCK1P16333 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.19■□□□□ 0.5
NCK1P16333 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 PCDHB18P-201ENST00000524813 2368 ntBASIC18.19■□□□□ 0.5
NCK1P16333 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 KRT17P1-201ENST00000399211 1546 ntBASIC18.19■□□□□ 0.5
NCK1P16333 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.19■□□□□ 0.5
NCK1P16333 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 KRT18P11-201ENST00000435214 1283 ntBASIC18.19■□□□□ 0.5
NCK1P16333 SDHAP1-207ENST00000440850 2000 ntBASIC18.19■□□□□ 0.5
NCK1P16333 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.19■□□□□ 0.5
NCK1P16333 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.19■□□□□ 0.5
NCK1P16333 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.19■□□□□ 0.5
NCK1P16333 AL589743.5-201ENST00000616611 1050 ntBASIC18.19■□□□□ 0.5
NCK1P16333 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.19■□□□□ 0.5
NCK1P16333 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.19■□□□□ 0.5
NCK1P16333 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NCK1P16333 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 AL512353.2-201ENST00000448759 1962 ntBASIC18.19■□□□□ 0.5
NCK1P16333 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCK1P16333 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NCK1P16333 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.18■□□□□ 0.5
NCK1P16333 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.18■□□□□ 0.5
NCK1P16333 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.18■□□□□ 0.5
NCK1P16333 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCK1P16333 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCK1P16333 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCK1P16333 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.18■□□□□ 0.5
NCK1P16333 AC093525.10-201ENST00000625130 1569 ntBASIC18.18■□□□□ 0.5
NCK1P16333 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCK1P16333 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCK1P16333 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCK1P16333 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCK1P16333 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCK1P16333 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.18■□□□□ 0.5
NCK1P16333 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.18■□□□□ 0.5
NCK1P16333 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.18■□□□□ 0.5
NCK1P16333 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.18■□□□□ 0.5
NCK1P16333 AC069236.1-201ENST00000604339 616 ntBASIC18.18■□□□□ 0.5
NCK1P16333 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCK1P16333 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCK1P16333 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
NCK1P16333 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.18■□□□□ 0.5
NCK1P16333 AC079598.2-202ENST00000546624 1451 ntBASIC18.18■□□□□ 0.5
NCK1P16333 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NCK1P16333 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCK1P16333 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.18■□□□□ 0.5
NCK1P16333 FZD10-202ENST00000539839 3282 ntBASIC18.18■□□□□ 0.5
NCK1P16333 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCK1P16333 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCK1P16333 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NCK1P16333 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.17■□□□□ 0.5
NCK1P16333 TFP1-202ENST00000475455 1573 ntBASIC18.17■□□□□ 0.5
NCK1P16333 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NCK1P16333 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.17■□□□□ 0.5
NCK1P16333 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.17■□□□□ 0.5
NCK1P16333 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms