Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.23■□□□□ 0.83
RARAP10276 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RARAP10276 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RARAP10276 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
RARAP10276 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.22■□□□□ 0.83
RARAP10276 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RARAP10276 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.22■□□□□ 0.83
RARAP10276 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.22■□□□□ 0.83
RARAP10276 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.22■□□□□ 0.83
RARAP10276 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
RARAP10276 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.22■□□□□ 0.83
RARAP10276 AC233263.1-201ENST00000578059 224 ntBASIC20.22■□□□□ 0.83
RARAP10276 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.22■□□□□ 0.83
RARAP10276 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.22■□□□□ 0.83
RARAP10276 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.22■□□□□ 0.83
RARAP10276 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RARAP10276 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RARAP10276 AL138781.2-201ENST00000617896 1843 ntBASIC20.22■□□□□ 0.83
RARAP10276 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.22■□□□□ 0.83
RARAP10276 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.22■□□□□ 0.83
RARAP10276 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RARAP10276 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RARAP10276 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RARAP10276 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RARAP10276 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RARAP10276 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RARAP10276 AC141586.3-201ENST00000562166 1838 ntBASIC20.21■□□□□ 0.83
RARAP10276 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RARAP10276 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
RARAP10276 KRT17P3-201ENST00000420566 1262 ntBASIC20.21■□□□□ 0.83
RARAP10276 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.21■□□□□ 0.83
RARAP10276 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
RARAP10276 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RARAP10276 AC069544.1-201ENST00000609399 999 ntBASIC20.21■□□□□ 0.83
RARAP10276 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.21■□□□□ 0.83
RARAP10276 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RARAP10276 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RARAP10276 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RARAP10276 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
RARAP10276 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
RARAP10276 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RARAP10276 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RARAP10276 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RARAP10276 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RARAP10276 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.2■□□□□ 0.82
RARAP10276 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.2■□□□□ 0.82
RARAP10276 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RARAP10276 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RARAP10276 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.2■□□□□ 0.82
RARAP10276 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RARAP10276 TUBB8P6-201ENST00000436895 1288 ntBASIC20.2■□□□□ 0.82
RARAP10276 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.2■□□□□ 0.82
RARAP10276 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RARAP10276 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.2■□□□□ 0.82
RARAP10276 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.2■□□□□ 0.82
RARAP10276 PRKY-204ENST00000533551 1019 ntBASIC20.2■□□□□ 0.82
RARAP10276 MTDHP1-201ENST00000605323 784 ntBASIC20.2■□□□□ 0.82
RARAP10276 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RARAP10276 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
RARAP10276 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RARAP10276 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RARAP10276 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RARAP10276 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RARAP10276 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.2■□□□□ 0.82
RARAP10276 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RARAP10276 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RARAP10276 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RARAP10276 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RARAP10276 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RARAP10276 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RARAP10276 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RARAP10276 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.19■□□□□ 0.82
RARAP10276 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.19■□□□□ 0.82
RARAP10276 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.19■□□□□ 0.82
RARAP10276 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.19■□□□□ 0.82
RARAP10276 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RARAP10276 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 ESRRAP1-201ENST00000400596 1257 ntBASIC20.19■□□□□ 0.82
RARAP10276 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RARAP10276 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.19■□□□□ 0.82
RARAP10276 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.19■□□□□ 0.82
RARAP10276 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RARAP10276 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.19■□□□□ 0.82
RARAP10276 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.19■□□□□ 0.82
RARAP10276 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RARAP10276 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms