Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
SNRPA1P09661 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SNRPA1P09661 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
SNRPA1P09661 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNRPA1P09661 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNRPA1P09661 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNRPA1P09661 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNRPA1P09661 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC24.57■■□□□ 1.52
SNRPA1P09661 TSPY23P-201ENST00000440136 739 ntBASIC24.57■■□□□ 1.52
SNRPA1P09661 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.57■■□□□ 1.52
SNRPA1P09661 HOMER2P1-201ENST00000455653 964 ntBASIC24.57■■□□□ 1.52
SNRPA1P09661 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC24.57■■□□□ 1.52
SNRPA1P09661 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC24.57■■□□□ 1.52
SNRPA1P09661 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNRPA1P09661 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNRPA1P09661 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SNRPA1P09661 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
SNRPA1P09661 SDHAP1-207ENST00000440850 2000 ntBASIC24.57■■□□□ 1.52
SNRPA1P09661 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.57■■□□□ 1.52
SNRPA1P09661 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SNRPA1P09661 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNRPA1P09661 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNRPA1P09661 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNRPA1P09661 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNRPA1P09661 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
SNRPA1P09661 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNRPA1P09661 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC24.56■■□□□ 1.52
SNRPA1P09661 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNRPA1P09661 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNRPA1P09661 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNRPA1P09661 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC24.56■■□□□ 1.52
SNRPA1P09661 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC24.56■■□□□ 1.52
SNRPA1P09661 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC24.56■■□□□ 1.52
SNRPA1P09661 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC24.56■■□□□ 1.52
SNRPA1P09661 AC091076.1-201ENST00000610741 619 ntBASIC24.56■■□□□ 1.52
SNRPA1P09661 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC24.56■■□□□ 1.52
SNRPA1P09661 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
SNRPA1P09661 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNRPA1P09661 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SNRPA1P09661 TBC1D3P2-202ENST00000577902 1649 ntBASIC24.56■■□□□ 1.52
SNRPA1P09661 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SNRPA1P09661 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC24.56■■□□□ 1.52
SNRPA1P09661 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNRPA1P09661 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRPA1P09661 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRPA1P09661 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.55■■□□□ 1.52
SNRPA1P09661 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
SNRPA1P09661 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.55■■□□□ 1.52
SNRPA1P09661 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.55■■□□□ 1.52
SNRPA1P09661 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRPA1P09661 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRPA1P09661 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRPA1P09661 BUB3-202ENST00000368859 667 ntTSL 3 BASIC24.55■■□□□ 1.52
SNRPA1P09661 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC24.55■■□□□ 1.52
SNRPA1P09661 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.55■■□□□ 1.52
SNRPA1P09661 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.55■■□□□ 1.52
SNRPA1P09661 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.55■■□□□ 1.52
SNRPA1P09661 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC24.55■■□□□ 1.52
SNRPA1P09661 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.55■■□□□ 1.52
SNRPA1P09661 ETFA-216ENST00000560726 942 ntTSL 3 BASIC24.55■■□□□ 1.52
SNRPA1P09661 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC24.55■■□□□ 1.52
SNRPA1P09661 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
SNRPA1P09661 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SNRPA1P09661 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRPA1P09661 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRPA1P09661 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.55■■□□□ 1.52
SNRPA1P09661 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC24.55■■□□□ 1.52
SNRPA1P09661 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
SNRPA1P09661 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
SNRPA1P09661 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNRPA1P09661 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SNRPA1P09661 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.54■■□□□ 1.52
SNRPA1P09661 TSPY21P-201ENST00000433481 731 ntBASIC24.54■■□□□ 1.52
SNRPA1P09661 NT5C-210ENST00000582160 860 ntTSL 2 BASIC24.54■■□□□ 1.52
SNRPA1P09661 MIR4674-201ENST00000582457 87 ntBASIC24.54■■□□□ 1.52
SNRPA1P09661 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC24.54■■□□□ 1.52
SNRPA1P09661 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
SNRPA1P09661 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC24.54■■□□□ 1.52
SNRPA1P09661 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNRPA1P09661 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
SNRPA1P09661 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC24.54■■□□□ 1.52
SNRPA1P09661 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC24.54■■□□□ 1.52
SNRPA1P09661 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNRPA1P09661 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC24.54■■□□□ 1.52
SNRPA1P09661 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
SNRPA1P09661 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 PKD1P6-201ENST00000343738 4769 ntBASIC24.53■■□□□ 1.52
SNRPA1P09661 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC24.53■■□□□ 1.52
SNRPA1P09661 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SNRPA1P09661 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.53■■□□□ 1.52
SNRPA1P09661 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms