Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD48P09326 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD48P09326 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.98■□□□□ 0.79
CD48P09326 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.98■□□□□ 0.79
CD48P09326 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD48P09326 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CD48P09326 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.98■□□□□ 0.79
CD48P09326 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD48P09326 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.98■□□□□ 0.79
CD48P09326 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CD48P09326 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.98■□□□□ 0.79
CD48P09326 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD48P09326 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD48P09326 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD48P09326 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.98■□□□□ 0.79
CD48P09326 POU5F1P3-201ENST00000428824 1078 ntBASIC19.98■□□□□ 0.79
CD48P09326 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.98■□□□□ 0.79
CD48P09326 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.98■□□□□ 0.79
CD48P09326 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CD48P09326 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CD48P09326 AC004264.1-201ENST00000608354 794 ntBASIC19.98■□□□□ 0.79
CD48P09326 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CD48P09326 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD48P09326 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD48P09326 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD48P09326 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.98■□□□□ 0.79
CD48P09326 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.98■□□□□ 0.79
CD48P09326 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CD48P09326 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.97■□□□□ 0.79
CD48P09326 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.97■□□□□ 0.79
CD48P09326 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.97■□□□□ 0.79
CD48P09326 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.97■□□□□ 0.79
CD48P09326 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CD48P09326 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CD48P09326 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.97■□□□□ 0.79
CD48P09326 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.97■□□□□ 0.79
CD48P09326 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.97■□□□□ 0.79
CD48P09326 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.97■□□□□ 0.79
CD48P09326 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.97■□□□□ 0.79
CD48P09326 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CD48P09326 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.97■□□□□ 0.79
CD48P09326 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD48P09326 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD48P09326 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.96■□□□□ 0.79
CD48P09326 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.96■□□□□ 0.79
CD48P09326 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CD48P09326 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD48P09326 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CD48P09326 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CD48P09326 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CD48P09326 FP475955.4-201ENST00000623131 1990 ntBASIC19.96■□□□□ 0.79
CD48P09326 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD48P09326 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD48P09326 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CD48P09326 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.96■□□□□ 0.79
CD48P09326 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD48P09326 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD48P09326 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD48P09326 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CD48P09326 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD48P09326 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD48P09326 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.96■□□□□ 0.79
CD48P09326 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.96■□□□□ 0.79
CD48P09326 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD48P09326 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD48P09326 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.95■□□□□ 0.78
CD48P09326 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.95■□□□□ 0.78
CD48P09326 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD48P09326 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD48P09326 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD48P09326 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD48P09326 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.95■□□□□ 0.78
CD48P09326 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD48P09326 TSPY20P-201ENST00000450910 630 ntBASIC19.95■□□□□ 0.78
CD48P09326 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.95■□□□□ 0.78
CD48P09326 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.95■□□□□ 0.78
CD48P09326 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.95■□□□□ 0.78
CD48P09326 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD48P09326 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD48P09326 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD48P09326 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CD48P09326 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD48P09326 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.95■□□□□ 0.78
CD48P09326 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD48P09326 IRX1P1-201ENST00000438849 1838 ntBASIC19.95■□□□□ 0.78
CD48P09326 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms