Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.05□□□□□ -0.48
APOBP04114 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC12.05□□□□□ -0.48
APOBP04114 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC12.05□□□□□ -0.48
APOBP04114 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.05□□□□□ -0.48
APOBP04114 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
APOBP04114 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC12.05□□□□□ -0.48
APOBP04114 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.05□□□□□ -0.48
APOBP04114 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC12.05□□□□□ -0.48
APOBP04114 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
APOBP04114 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
APOBP04114 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC12.05□□□□□ -0.48
APOBP04114 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 MIR3917-201ENST00000580971 93 ntBASIC12.04□□□□□ -0.48
APOBP04114 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 AC024243.1-201ENST00000609234 778 ntBASIC12.04□□□□□ -0.48
APOBP04114 REXO1L6P-202ENST00000619970 1078 ntBASIC12.04□□□□□ -0.48
APOBP04114 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC12.04□□□□□ -0.48
APOBP04114 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC12.04□□□□□ -0.48
APOBP04114 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.04□□□□□ -0.48
APOBP04114 BX276092.5-203ENST00000456199 560 ntBASIC12.04□□□□□ -0.48
APOBP04114 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
APOBP04114 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
APOBP04114 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
APOBP04114 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.04□□□□□ -0.48
APOBP04114 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.04□□□□□ -0.48
APOBP04114 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.04□□□□□ -0.48
APOBP04114 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.04□□□□□ -0.48
APOBP04114 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.04□□□□□ -0.48
APOBP04114 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 GPAT2P1-201ENST00000444924 1672 ntBASIC12.04□□□□□ -0.48
APOBP04114 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
APOBP04114 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 EP400NL-214ENST00000641289 2402 ntBASIC12.04□□□□□ -0.48
APOBP04114 AC117500.6-201ENST00000624871 588 ntBASIC12.04□□□□□ -0.48
APOBP04114 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
APOBP04114 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOBP04114 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
APOBP04114 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOBP04114 KRT8P26-201ENST00000534154 1276 ntBASIC12.03□□□□□ -0.48
APOBP04114 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
APOBP04114 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.03□□□□□ -0.48
APOBP04114 AP001271.2-201ENST00000624018 1556 ntBASIC12.03□□□□□ -0.48
APOBP04114 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC12.03□□□□□ -0.48
APOBP04114 HLA-A-201ENST00000376802 1334 ntBASIC12.03□□□□□ -0.48
APOBP04114 AC007225.1-201ENST00000566331 1836 ntBASIC12.03□□□□□ -0.48
APOBP04114 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
APOBP04114 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOBP04114 PMS2P1-201ENST00000431037 1228 ntBASIC12.03□□□□□ -0.48
APOBP04114 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.03□□□□□ -0.48
APOBP04114 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
APOBP04114 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.03□□□□□ -0.48
APOBP04114 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOBP04114 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOBP04114 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOBP04114 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC12.03□□□□□ -0.48
APOBP04114 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
APOBP04114 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC12.03□□□□□ -0.48
APOBP04114 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOBP04114 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOBP04114 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOBP04114 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
APOBP04114 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC12.03□□□□□ -0.48
APOBP04114 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
APOBP04114 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOBP04114 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC12.02□□□□□ -0.48
APOBP04114 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.02□□□□□ -0.48
APOBP04114 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
APOBP04114 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.02□□□□□ -0.48
APOBP04114 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
APOBP04114 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.02□□□□□ -0.48
APOBP04114 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
APOBP04114 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
APOBP04114 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
APOBP04114 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC12.02□□□□□ -0.49
APOBP04114 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOBP04114 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms