Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CHRNA1P02708 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.99■□□□□ 0.95
CHRNA1P02708 AC009947.2-201ENST00000444014 672 ntBASIC20.99■□□□□ 0.95
CHRNA1P02708 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.99■□□□□ 0.95
CHRNA1P02708 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.99■□□□□ 0.95
CHRNA1P02708 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.99■□□□□ 0.95
CHRNA1P02708 MIR4674-201ENST00000582457 87 ntBASIC20.99■□□□□ 0.95
CHRNA1P02708 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.99■□□□□ 0.95
CHRNA1P02708 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.99■□□□□ 0.95
CHRNA1P02708 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.99■□□□□ 0.95
CHRNA1P02708 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CHRNA1P02708 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CHRNA1P02708 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.99■□□□□ 0.95
CHRNA1P02708 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNA1P02708 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNA1P02708 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.98■□□□□ 0.95
CHRNA1P02708 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.98■□□□□ 0.95
CHRNA1P02708 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNA1P02708 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CHRNA1P02708 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.98■□□□□ 0.95
CHRNA1P02708 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNA1P02708 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.98■□□□□ 0.95
CHRNA1P02708 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.98■□□□□ 0.95
CHRNA1P02708 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CHRNA1P02708 TCF3P1-201ENST00000423021 1937 ntBASIC20.98■□□□□ 0.95
CHRNA1P02708 IER3-202ENST00000376377 1350 ntBASIC20.97■□□□□ 0.95
CHRNA1P02708 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA1P02708 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.97■□□□□ 0.95
CHRNA1P02708 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA1P02708 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.97■□□□□ 0.95
CHRNA1P02708 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA1P02708 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA1P02708 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA1P02708 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.97■□□□□ 0.95
CHRNA1P02708 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA1P02708 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.97■□□□□ 0.95
CHRNA1P02708 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.97■□□□□ 0.95
CHRNA1P02708 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA1P02708 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA1P02708 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CHRNA1P02708 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA1P02708 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA1P02708 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHRNA1P02708 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA1P02708 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA1P02708 ZNF815P-204ENST00000434898 1737 ntBASIC20.96■□□□□ 0.95
CHRNA1P02708 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA1P02708 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA1P02708 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA1P02708 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA1P02708 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.96■□□□□ 0.95
CHRNA1P02708 GCSHP2-201ENST00000560971 527 ntBASIC20.96■□□□□ 0.95
CHRNA1P02708 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.96■□□□□ 0.95
CHRNA1P02708 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA1P02708 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
CHRNA1P02708 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CHRNA1P02708 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA1P02708 AC005332.1-201ENST00000577698 1310 ntBASIC20.96■□□□□ 0.95
CHRNA1P02708 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.96■□□□□ 0.95
CHRNA1P02708 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
CHRNA1P02708 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CHRNA1P02708 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA1P02708 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA1P02708 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA1P02708 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.95■□□□□ 0.94
CHRNA1P02708 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.95■□□□□ 0.94
CHRNA1P02708 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA1P02708 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.95■□□□□ 0.94
CHRNA1P02708 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.95■□□□□ 0.94
CHRNA1P02708 NEK4P2-201ENST00000580004 1012 ntBASIC20.95■□□□□ 0.94
CHRNA1P02708 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.95■□□□□ 0.94
CHRNA1P02708 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHRNA1P02708 AC116407.4-201ENST00000623319 1061 ntBASIC20.95■□□□□ 0.94
CHRNA1P02708 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA1P02708 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.95■□□□□ 0.94
CHRNA1P02708 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA1P02708 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA1P02708 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
CHRNA1P02708 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
CHRNA1P02708 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA1P02708 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHRNA1P02708 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA1P02708 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA1P02708 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.94■□□□□ 0.94
CHRNA1P02708 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA1P02708 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHRNA1P02708 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA1P02708 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CHRNA1P02708 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.94■□□□□ 0.94
CHRNA1P02708 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.94■□□□□ 0.94
CHRNA1P02708 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
CHRNA1P02708 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA1P02708 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms