Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
USH2AO75445 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USH2AO75445 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
USH2AO75445 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
USH2AO75445 UPF3AP3-201ENST00000420996 769 ntBASIC8.62□□□□□ -1.03
USH2AO75445 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USH2AO75445 AC112482.1-201ENST00000492080 688 ntBASIC8.62□□□□□ -1.03
USH2AO75445 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USH2AO75445 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
USH2AO75445 H19-201ENST00000411754 1788 ntTSL 5 BASIC8.62□□□□□ -1.03
USH2AO75445 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
USH2AO75445 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
USH2AO75445 AC242852.2-201ENST00000615738 1807 ntBASIC8.62□□□□□ -1.03
USH2AO75445 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
USH2AO75445 TMEM179-206ENST00000616017 1645 ntBASIC8.62□□□□□ -1.03
USH2AO75445 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
USH2AO75445 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
USH2AO75445 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
USH2AO75445 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC8.62□□□□□ -1.03
USH2AO75445 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
USH2AO75445 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
USH2AO75445 DRAXINP1-201ENST00000437611 948 ntBASIC8.62□□□□□ -1.03
USH2AO75445 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
USH2AO75445 ABR-204ENST00000543210 1049 ntTSL 2 BASIC8.62□□□□□ -1.03
USH2AO75445 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC8.62□□□□□ -1.03
USH2AO75445 AC012645.4-201ENST00000610691 1061 ntBASIC8.62□□□□□ -1.03
USH2AO75445 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC8.62□□□□□ -1.03
USH2AO75445 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
USH2AO75445 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC8.61□□□□□ -1.03
USH2AO75445 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC8.61□□□□□ -1.03
USH2AO75445 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC8.61□□□□□ -1.03
USH2AO75445 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC8.61□□□□□ -1.03
USH2AO75445 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC8.61□□□□□ -1.03
USH2AO75445 AC027601.4-201ENST00000611259 610 ntBASIC8.61□□□□□ -1.03
USH2AO75445 MIR2861-201ENST00000636310 90 ntBASIC8.61□□□□□ -1.03
USH2AO75445 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC8.61□□□□□ -1.03
USH2AO75445 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC8.61□□□□□ -1.03
USH2AO75445 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC8.61□□□□□ -1.03
USH2AO75445 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC8.61□□□□□ -1.03
USH2AO75445 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC8.61□□□□□ -1.03
USH2AO75445 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC8.61□□□□□ -1.03
USH2AO75445 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
USH2AO75445 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC8.61□□□□□ -1.03
USH2AO75445 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC8.61□□□□□ -1.03
USH2AO75445 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 SAPCD2P3-201ENST00000455031 850 ntBASIC8.61□□□□□ -1.03
USH2AO75445 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC8.61□□□□□ -1.03
USH2AO75445 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
USH2AO75445 Z83836.1-201ENST00000624605 1642 ntBASIC8.61□□□□□ -1.03
USH2AO75445 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 TPM1-218ENST00000559281 851 ntTSL 5 BASIC8.61□□□□□ -1.03
USH2AO75445 LITAF-211ENST00000572255 516 ntTSL 4 BASIC8.61□□□□□ -1.03
USH2AO75445 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
USH2AO75445 AC092364.2-202ENST00000597012 1073 ntBASIC8.61□□□□□ -1.03
USH2AO75445 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC8.61□□□□□ -1.03
USH2AO75445 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
USH2AO75445 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC8.6□□□□□ -1.03
USH2AO75445 AC004967.1-201ENST00000453589 447 ntBASIC8.6□□□□□ -1.03
USH2AO75445 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
USH2AO75445 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC8.6□□□□□ -1.03
USH2AO75445 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC8.6□□□□□ -1.03
USH2AO75445 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 AC104109.2-201ENST00000602919 1418 ntBASIC8.6□□□□□ -1.03
USH2AO75445 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
USH2AO75445 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC8.6□□□□□ -1.03
USH2AO75445 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
USH2AO75445 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC8.6□□□□□ -1.03
USH2AO75445 AC091607.1-201ENST00000490318 1060 ntBASIC8.6□□□□□ -1.03
USH2AO75445 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC8.6□□□□□ -1.03
USH2AO75445 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC8.6□□□□□ -1.03
USH2AO75445 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC8.6□□□□□ -1.03
USH2AO75445 AL596442.2-201ENST00000610240 980 ntBASIC8.6□□□□□ -1.03
USH2AO75445 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC8.6□□□□□ -1.03
USH2AO75445 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC8.6□□□□□ -1.03
USH2AO75445 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC8.6□□□□□ -1.03
USH2AO75445 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC8.6□□□□□ -1.03
USH2AO75445 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms