Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ACTN4O43707 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 IRX1P1-201ENST00000438849 1838 ntBASIC21.63■■□□□ 1.05
ACTN4O43707 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
ACTN4O43707 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ACTN4O43707 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
ACTN4O43707 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.62■■□□□ 1.05
ACTN4O43707 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ACTN4O43707 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.62■■□□□ 1.05
ACTN4O43707 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.62■■□□□ 1.05
ACTN4O43707 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ACTN4O43707 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ACTN4O43707 ID1-201ENST00000376105 1233 ntBASIC21.62■■□□□ 1.05
ACTN4O43707 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
ACTN4O43707 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.62■■□□□ 1.05
ACTN4O43707 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.62■■□□□ 1.05
ACTN4O43707 AC233263.1-201ENST00000578059 224 ntBASIC21.62■■□□□ 1.05
ACTN4O43707 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ACTN4O43707 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.62■■□□□ 1.05
ACTN4O43707 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
ACTN4O43707 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ACTN4O43707 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.62■■□□□ 1.05
ACTN4O43707 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
ACTN4O43707 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ACTN4O43707 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ACTN4O43707 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ACTN4O43707 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ACTN4O43707 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ACTN4O43707 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
ACTN4O43707 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ACTN4O43707 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ACTN4O43707 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.61■■□□□ 1.05
ACTN4O43707 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.61■■□□□ 1.05
ACTN4O43707 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ACTN4O43707 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ACTN4O43707 AP003097.1-201ENST00000530657 1135 ntBASIC21.61■■□□□ 1.05
ACTN4O43707 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ACTN4O43707 AL138781.2-201ENST00000617896 1843 ntBASIC21.61■■□□□ 1.05
ACTN4O43707 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ACTN4O43707 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ACTN4O43707 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
ACTN4O43707 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ACTN4O43707 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.61■■□□□ 1.05
ACTN4O43707 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.61■■□□□ 1.05
ACTN4O43707 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ACTN4O43707 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.61■■□□□ 1.05
ACTN4O43707 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.61■■□□□ 1.05
ACTN4O43707 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.61■■□□□ 1.05
ACTN4O43707 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
ACTN4O43707 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
ACTN4O43707 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.6■■□□□ 1.05
ACTN4O43707 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.6■■□□□ 1.05
ACTN4O43707 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.6■■□□□ 1.05
ACTN4O43707 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.6■■□□□ 1.05
ACTN4O43707 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ACTN4O43707 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ACTN4O43707 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
ACTN4O43707 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.6■■□□□ 1.05
ACTN4O43707 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
ACTN4O43707 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.6■■□□□ 1.05
ACTN4O43707 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.6■■□□□ 1.05
ACTN4O43707 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ACTN4O43707 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ACTN4O43707 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ACTN4O43707 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.59■■□□□ 1.05
ACTN4O43707 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
ACTN4O43707 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ACTN4O43707 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ACTN4O43707 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ACTN4O43707 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ACTN4O43707 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.59■■□□□ 1.05
ACTN4O43707 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ACTN4O43707 RNA5SP413-201ENST00000516373 109 ntBASIC21.59■■□□□ 1.05
ACTN4O43707 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.59■■□□□ 1.05
ACTN4O43707 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.59■■□□□ 1.05
ACTN4O43707 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ACTN4O43707 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.59■■□□□ 1.05
ACTN4O43707 MTDHP1-201ENST00000605323 784 ntBASIC21.59■■□□□ 1.05
ACTN4O43707 AC069544.1-201ENST00000609399 999 ntBASIC21.59■■□□□ 1.05
ACTN4O43707 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ACTN4O43707 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms