Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PHGDHO43175 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.16■□□□□ 0.66
PHGDHO43175 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
PHGDHO43175 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHGDHO43175 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.16■□□□□ 0.66
PHGDHO43175 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHGDHO43175 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHGDHO43175 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHGDHO43175 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHGDHO43175 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
PHGDHO43175 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.15■□□□□ 0.66
PHGDHO43175 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PHGDHO43175 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.15■□□□□ 0.66
PHGDHO43175 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PHGDHO43175 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PHGDHO43175 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.15■□□□□ 0.66
PHGDHO43175 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PHGDHO43175 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.15■□□□□ 0.66
PHGDHO43175 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.15■□□□□ 0.66
PHGDHO43175 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.15■□□□□ 0.66
PHGDHO43175 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.15■□□□□ 0.66
PHGDHO43175 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PHGDHO43175 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHGDHO43175 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.14■□□□□ 0.66
PHGDHO43175 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PHGDHO43175 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PHGDHO43175 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PHGDHO43175 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.14■□□□□ 0.66
PHGDHO43175 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHGDHO43175 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHGDHO43175 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.14■□□□□ 0.65
PHGDHO43175 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.14■□□□□ 0.65
PHGDHO43175 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PHGDHO43175 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PHGDHO43175 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHGDHO43175 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHGDHO43175 AC069152.1-201ENST00000438030 544 ntBASIC19.14■□□□□ 0.65
PHGDHO43175 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.14■□□□□ 0.65
PHGDHO43175 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.14■□□□□ 0.65
PHGDHO43175 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PHGDHO43175 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.14■□□□□ 0.65
PHGDHO43175 AC092666.2-201ENST00000613287 246 ntBASIC19.14■□□□□ 0.65
PHGDHO43175 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.14■□□□□ 0.65
PHGDHO43175 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PHGDHO43175 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PHGDHO43175 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHGDHO43175 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHGDHO43175 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PHGDHO43175 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHGDHO43175 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHGDHO43175 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHGDHO43175 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHGDHO43175 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PHGDHO43175 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHGDHO43175 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHGDHO43175 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.13■□□□□ 0.65
PHGDHO43175 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PHGDHO43175 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHGDHO43175 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PHGDHO43175 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHGDHO43175 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.13■□□□□ 0.65
PHGDHO43175 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.13■□□□□ 0.65
PHGDHO43175 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.13■□□□□ 0.65
PHGDHO43175 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.13■□□□□ 0.65
PHGDHO43175 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.13■□□□□ 0.65
PHGDHO43175 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PHGDHO43175 AC008687.6-201ENST00000596318 630 ntBASIC19.13■□□□□ 0.65
PHGDHO43175 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHGDHO43175 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PHGDHO43175 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.13■□□□□ 0.65
PHGDHO43175 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PHGDHO43175 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.13■□□□□ 0.65
PHGDHO43175 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PHGDHO43175 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PHGDHO43175 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.13■□□□□ 0.65
PHGDHO43175 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.13■□□□□ 0.65
PHGDHO43175 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.13■□□□□ 0.65
PHGDHO43175 NEFHP1-201ENST00000412845 2629 ntBASIC19.13■□□□□ 0.65
PHGDHO43175 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
PHGDHO43175 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHGDHO43175 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHGDHO43175 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHGDHO43175 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHGDHO43175 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms