Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.07■□□□□ 0.96
TNRC18O15417 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNRC18O15417 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNRC18O15417 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNRC18O15417 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.07■□□□□ 0.96
TNRC18O15417 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNRC18O15417 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.07■□□□□ 0.96
TNRC18O15417 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNRC18O15417 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TNRC18O15417 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TNRC18O15417 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TNRC18O15417 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TNRC18O15417 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNRC18O15417 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.06■□□□□ 0.96
TNRC18O15417 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.06■□□□□ 0.96
TNRC18O15417 AC040169.1-201ENST00000565382 521 ntBASIC21.06■□□□□ 0.96
TNRC18O15417 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TNRC18O15417 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNRC18O15417 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNRC18O15417 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TNRC18O15417 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TNRC18O15417 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNRC18O15417 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.06■□□□□ 0.96
TNRC18O15417 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.06■□□□□ 0.96
TNRC18O15417 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNRC18O15417 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.05■□□□□ 0.96
TNRC18O15417 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TNRC18O15417 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.05■□□□□ 0.96
TNRC18O15417 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNRC18O15417 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.05■□□□□ 0.96
TNRC18O15417 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.05■□□□□ 0.96
TNRC18O15417 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.05■□□□□ 0.96
TNRC18O15417 AC024243.1-201ENST00000609234 778 ntBASIC21.05■□□□□ 0.96
TNRC18O15417 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.05■□□□□ 0.96
TNRC18O15417 AC104109.2-201ENST00000602919 1418 ntBASIC21.05■□□□□ 0.96
TNRC18O15417 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNRC18O15417 AC245100.3-201ENST00000441281 285 ntBASIC21.05■□□□□ 0.96
TNRC18O15417 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.05■□□□□ 0.96
TNRC18O15417 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNRC18O15417 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.05■□□□□ 0.96
TNRC18O15417 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.05■□□□□ 0.96
TNRC18O15417 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNRC18O15417 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNRC18O15417 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.05■□□□□ 0.96
TNRC18O15417 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TNRC18O15417 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
TNRC18O15417 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.04■□□□□ 0.96
TNRC18O15417 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.04■□□□□ 0.96
TNRC18O15417 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.04■□□□□ 0.96
TNRC18O15417 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.04■□□□□ 0.96
TNRC18O15417 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.04■□□□□ 0.96
TNRC18O15417 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNRC18O15417 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNRC18O15417 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNRC18O15417 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNRC18O15417 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNRC18O15417 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNRC18O15417 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNRC18O15417 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNRC18O15417 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.03■□□□□ 0.96
TNRC18O15417 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.03■□□□□ 0.96
TNRC18O15417 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.03■□□□□ 0.96
TNRC18O15417 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.03■□□□□ 0.96
TNRC18O15417 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 AL391807.1-203ENST00000604392 2365 ntBASIC21.03■□□□□ 0.96
TNRC18O15417 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.03■□□□□ 0.96
TNRC18O15417 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 BCRP1-201ENST00000444246 691 ntBASIC21.03■□□□□ 0.96
TNRC18O15417 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
TNRC18O15417 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.03■□□□□ 0.96
TNRC18O15417 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.03■□□□□ 0.96
TNRC18O15417 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.03■□□□□ 0.96
TNRC18O15417 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNRC18O15417 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.03■□□□□ 0.96
TNRC18O15417 AC138761.1-201ENST00000584393 385 ntBASIC21.03■□□□□ 0.96
TNRC18O15417 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.03■□□□□ 0.96
TNRC18O15417 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNRC18O15417 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNRC18O15417 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNRC18O15417 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.02■□□□□ 0.96
TNRC18O15417 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.02■□□□□ 0.96
TNRC18O15417 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.02■□□□□ 0.96
TNRC18O15417 FAM215A-202ENST00000632077 792 ntBASIC21.02■□□□□ 0.96
TNRC18O15417 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.02■□□□□ 0.96
TNRC18O15417 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.02■□□□□ 0.96
TNRC18O15417 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21.02■□□□□ 0.96
TNRC18O15417 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.02■□□□□ 0.96
TNRC18O15417 DUX4L17-201ENST00000557360 1267 ntBASIC21.02■□□□□ 0.96
TNRC18O15417 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms