Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.76■□□□□ 0.59
HDAC3O15379 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.76■□□□□ 0.59
HDAC3O15379 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.76■□□□□ 0.59
HDAC3O15379 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDAC3O15379 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HDAC3O15379 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDAC3O15379 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.76■□□□□ 0.59
HDAC3O15379 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.76■□□□□ 0.59
HDAC3O15379 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDAC3O15379 LSM12P1-201ENST00000411836 588 ntBASIC18.76■□□□□ 0.59
HDAC3O15379 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HDAC3O15379 KRT18P5-201ENST00000436075 1291 ntBASIC18.76■□□□□ 0.59
HDAC3O15379 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.76■□□□□ 0.59
HDAC3O15379 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.76■□□□□ 0.59
HDAC3O15379 MIR6821-201ENST00000617625 74 ntBASIC18.76■□□□□ 0.59
HDAC3O15379 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDAC3O15379 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HDAC3O15379 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HDAC3O15379 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HDAC3O15379 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HDAC3O15379 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HDAC3O15379 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HDAC3O15379 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HDAC3O15379 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HDAC3O15379 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HDAC3O15379 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HDAC3O15379 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HDAC3O15379 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HDAC3O15379 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.75■□□□□ 0.59
HDAC3O15379 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HDAC3O15379 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.75■□□□□ 0.59
HDAC3O15379 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.75■□□□□ 0.59
HDAC3O15379 AC073210.2-201ENST00000430369 194 ntBASIC18.75■□□□□ 0.59
HDAC3O15379 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HDAC3O15379 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.75■□□□□ 0.59
HDAC3O15379 AC087623.3-201ENST00000607047 1098 ntBASIC18.75■□□□□ 0.59
HDAC3O15379 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HDAC3O15379 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HDAC3O15379 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HDAC3O15379 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
HDAC3O15379 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.74■□□□□ 0.59
HDAC3O15379 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDAC3O15379 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDAC3O15379 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDAC3O15379 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.74■□□□□ 0.59
HDAC3O15379 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDAC3O15379 BICD1-207ENST00000551848 1962 ntBASIC18.74■□□□□ 0.59
HDAC3O15379 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HDAC3O15379 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDAC3O15379 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDAC3O15379 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HDAC3O15379 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDAC3O15379 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HDAC3O15379 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HDAC3O15379 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.74■□□□□ 0.59
HDAC3O15379 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.74■□□□□ 0.59
HDAC3O15379 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDAC3O15379 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDAC3O15379 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HDAC3O15379 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HDAC3O15379 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDAC3O15379 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDAC3O15379 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
HDAC3O15379 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.73■□□□□ 0.59
HDAC3O15379 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HDAC3O15379 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.73■□□□□ 0.59
HDAC3O15379 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
HDAC3O15379 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.73■□□□□ 0.59
HDAC3O15379 AL390719.1-204ENST00000412397 1219 ntBASIC18.73■□□□□ 0.59
HDAC3O15379 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.73■□□□□ 0.59
HDAC3O15379 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.73■□□□□ 0.59
HDAC3O15379 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.73■□□□□ 0.59
HDAC3O15379 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.73■□□□□ 0.59
HDAC3O15379 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.73■□□□□ 0.59
HDAC3O15379 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.73■□□□□ 0.59
HDAC3O15379 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDAC3O15379 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
HDAC3O15379 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.72■□□□□ 0.59
HDAC3O15379 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC3O15379 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.72■□□□□ 0.59
HDAC3O15379 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC3O15379 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.72■□□□□ 0.59
HDAC3O15379 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.72■□□□□ 0.59
HDAC3O15379 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC3O15379 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC3O15379 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms