Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CLDN4O14493 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN4O14493 AL158211.5-201ENST00000623583 2518 ntBASIC18.17■□□□□ 0.5
CLDN4O14493 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.17■□□□□ 0.5
CLDN4O14493 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN4O14493 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CLDN4O14493 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN4O14493 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLDN4O14493 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN4O14493 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.17■□□□□ 0.5
CLDN4O14493 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN4O14493 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLDN4O14493 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN4O14493 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN4O14493 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN4O14493 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN4O14493 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN4O14493 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN4O14493 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLDN4O14493 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN4O14493 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN4O14493 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLDN4O14493 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN4O14493 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CLDN4O14493 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN4O14493 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN4O14493 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN4O14493 AC004980.1-204ENST00000429707 299 ntBASIC18.16■□□□□ 0.5
CLDN4O14493 SNORA78-201ENST00000459373 127 ntBASIC18.16■□□□□ 0.5
CLDN4O14493 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN4O14493 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN4O14493 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN4O14493 MIR4497-201ENST00000583208 89 ntBASIC18.16■□□□□ 0.5
CLDN4O14493 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN4O14493 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN4O14493 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN4O14493 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CLDN4O14493 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLDN4O14493 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN4O14493 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN4O14493 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN4O14493 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLDN4O14493 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CLDN4O14493 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN4O14493 AC104417.2-201ENST00000562989 1793 ntBASIC18.15■□□□□ 0.5
CLDN4O14493 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN4O14493 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLDN4O14493 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN4O14493 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN4O14493 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 NUDT16P1-203ENST00000513809 620 ntBASIC18.15■□□□□ 0.5
CLDN4O14493 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN4O14493 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDN4O14493 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN4O14493 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 AC026471.5-201ENST00000615068 467 ntBASIC18.15■□□□□ 0.5
CLDN4O14493 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
CLDN4O14493 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN4O14493 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLDN4O14493 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN4O14493 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN4O14493 FSCN1P1-201ENST00000568912 1481 ntBASIC18.14■□□□□ 0.5
CLDN4O14493 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN4O14493 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN4O14493 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN4O14493 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN4O14493 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN4O14493 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN4O14493 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLDN4O14493 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CLDN4O14493 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN4O14493 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.14■□□□□ 0.49
CLDN4O14493 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms