Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1AO00555 MIR2861-201ENST00000636310 90 ntBASIC18.21■□□□□ 0.51
CACNA1AO00555 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1AO00555 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1AO00555 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CACNA1AO00555 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.21■□□□□ 0.51
CACNA1AO00555 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.21■□□□□ 0.51
CACNA1AO00555 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1AO00555 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1AO00555 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1AO00555 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.21■□□□□ 0.51
CACNA1AO00555 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1AO00555 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.21■□□□□ 0.51
CACNA1AO00555 HNRNPDP1-201ENST00000439535 754 ntBASIC18.21■□□□□ 0.51
CACNA1AO00555 AC034105.1-201ENST00000563488 319 ntBASIC18.21■□□□□ 0.51
CACNA1AO00555 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.21■□□□□ 0.51
CACNA1AO00555 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CACNA1AO00555 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1AO00555 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1AO00555 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1AO00555 AC020928.2-201ENST00000588717 2197 ntBASIC18.21■□□□□ 0.51
CACNA1AO00555 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1AO00555 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CACNA1AO00555 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNA1AO00555 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.21■□□□□ 0.5
CACNA1AO00555 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CACNA1AO00555 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.2■□□□□ 0.5
CACNA1AO00555 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CACNA1AO00555 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.2■□□□□ 0.5
CACNA1AO00555 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.2■□□□□ 0.5
CACNA1AO00555 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.2■□□□□ 0.5
CACNA1AO00555 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 FAM215A-202ENST00000632077 792 ntBASIC18.2■□□□□ 0.5
CACNA1AO00555 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.2■□□□□ 0.5
CACNA1AO00555 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.2■□□□□ 0.5
CACNA1AO00555 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 MIR770-201ENST00000390219 98 ntBASIC18.2■□□□□ 0.5
CACNA1AO00555 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.2■□□□□ 0.5
CACNA1AO00555 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
CACNA1AO00555 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CACNA1AO00555 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.2■□□□□ 0.5
CACNA1AO00555 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACNA1AO00555 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.2■□□□□ 0.5
CACNA1AO00555 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.2■□□□□ 0.5
CACNA1AO00555 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CACNA1AO00555 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNA1AO00555 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.19■□□□□ 0.5
CACNA1AO00555 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNA1AO00555 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.19■□□□□ 0.5
CACNA1AO00555 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.19■□□□□ 0.5
CACNA1AO00555 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNA1AO00555 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNA1AO00555 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.19■□□□□ 0.5
CACNA1AO00555 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CACNA1AO00555 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CACNA1AO00555 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNA1AO00555 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.19■□□□□ 0.5
CACNA1AO00555 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CACNA1AO00555 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.19■□□□□ 0.5
CACNA1AO00555 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.19■□□□□ 0.5
CACNA1AO00555 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.19■□□□□ 0.5
CACNA1AO00555 AC190387.1-201ENST00000551683 408 ntBASIC18.19■□□□□ 0.5
CACNA1AO00555 AP005901.3-202ENST00000581653 237 ntBASIC18.19■□□□□ 0.5
CACNA1AO00555 AL096865.1-201ENST00000606796 927 ntBASIC18.19■□□□□ 0.5
CACNA1AO00555 AIRN-201ENST00000601203 4374 ntBASIC18.19■□□□□ 0.5
CACNA1AO00555 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1AO00555 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1AO00555 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.18■□□□□ 0.5
CACNA1AO00555 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.18■□□□□ 0.5
CACNA1AO00555 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1AO00555 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.18■□□□□ 0.5
CACNA1AO00555 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.18■□□□□ 0.5
CACNA1AO00555 AL157888.1-201ENST00000631930 593 ntBASIC18.18■□□□□ 0.5
CACNA1AO00555 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CACNA1AO00555 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.18■□□□□ 0.5
CACNA1AO00555 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1AO00555 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1AO00555 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.18■□□□□ 0.5
CACNA1AO00555 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1AO00555 MIR6752-201ENST00000618442 71 ntBASIC18.18■□□□□ 0.5
CACNA1AO00555 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1AO00555 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNA1AO00555 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.17■□□□□ 0.5
CACNA1AO00555 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CACNA1AO00555 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.17■□□□□ 0.5
CACNA1AO00555 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNA1AO00555 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CACNA1AO00555 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CACNA1AO00555 AL645939.2-201ENST00000427340 991 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms