Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.28■□□□□ 0.52
UPK1AO00322 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
UPK1AO00322 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.28■□□□□ 0.52
UPK1AO00322 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1AO00322 AL161938.1-201ENST00000569833 2180 ntBASIC18.28■□□□□ 0.52
UPK1AO00322 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.28■□□□□ 0.52
UPK1AO00322 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1AO00322 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.27■□□□□ 0.52
UPK1AO00322 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1AO00322 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1AO00322 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1AO00322 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.27■□□□□ 0.52
UPK1AO00322 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1AO00322 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1AO00322 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1AO00322 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1AO00322 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.27■□□□□ 0.52
UPK1AO00322 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.27■□□□□ 0.52
UPK1AO00322 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
UPK1AO00322 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.27■□□□□ 0.52
UPK1AO00322 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1AO00322 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.27■□□□□ 0.52
UPK1AO00322 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.27■□□□□ 0.52
UPK1AO00322 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1AO00322 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.27■□□□□ 0.52
UPK1AO00322 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1AO00322 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1AO00322 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1AO00322 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.27■□□□□ 0.51
UPK1AO00322 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPK1AO00322 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPK1AO00322 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPK1AO00322 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
UPK1AO00322 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPK1AO00322 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPK1AO00322 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPK1AO00322 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UPK1AO00322 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
UPK1AO00322 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPK1AO00322 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.26■□□□□ 0.51
UPK1AO00322 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
UPK1AO00322 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 AC005332.8-201ENST00000622750 2735 ntBASIC18.26■□□□□ 0.51
UPK1AO00322 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 AC006333.2-201ENST00000607957 2099 ntBASIC18.26■□□□□ 0.51
UPK1AO00322 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.26■□□□□ 0.51
UPK1AO00322 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UPK1AO00322 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.26■□□□□ 0.51
UPK1AO00322 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UPK1AO00322 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UPK1AO00322 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UPK1AO00322 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.26■□□□□ 0.51
UPK1AO00322 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 AC026366.1-201ENST00000488803 879 ntBASIC18.26■□□□□ 0.51
UPK1AO00322 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.26■□□□□ 0.51
UPK1AO00322 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.26■□□□□ 0.51
UPK1AO00322 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.26■□□□□ 0.51
UPK1AO00322 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UPK1AO00322 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.26■□□□□ 0.51
UPK1AO00322 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.26■□□□□ 0.51
UPK1AO00322 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UPK1AO00322 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.26■□□□□ 0.51
UPK1AO00322 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.26■□□□□ 0.51
UPK1AO00322 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1AO00322 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
UPK1AO00322 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
UPK1AO00322 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
UPK1AO00322 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
UPK1AO00322 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.25■□□□□ 0.51
UPK1AO00322 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.25■□□□□ 0.51
UPK1AO00322 YBX1P10-201ENST00000444752 975 ntBASIC18.25■□□□□ 0.51
UPK1AO00322 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.25■□□□□ 0.51
UPK1AO00322 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
UPK1AO00322 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.25■□□□□ 0.51
UPK1AO00322 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms