Protein–RNA interactions for Protein: A6NGB9

WIPF3, WAS/WASL-interacting protein family member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WIPF3A6NGB9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
WIPF3A6NGB9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
WIPF3A6NGB9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.44■□□□□ 0.38
WIPF3A6NGB9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.44■□□□□ 0.38
WIPF3A6NGB9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
WIPF3A6NGB9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.44■□□□□ 0.38
WIPF3A6NGB9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 SLC25A1P2-201ENST00000430693 912 ntBASIC17.43■□□□□ 0.38
WIPF3A6NGB9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 HOMER2P1-201ENST00000455653 964 ntBASIC17.43■□□□□ 0.38
WIPF3A6NGB9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 AC131212.4-201ENST00000623606 975 ntBASIC17.43■□□□□ 0.38
WIPF3A6NGB9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
WIPF3A6NGB9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 CCR12P-201ENST00000446203 998 ntBASIC17.42■□□□□ 0.38
WIPF3A6NGB9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 AL691432.3-201ENST00000621860 400 ntBASIC17.42■□□□□ 0.38
WIPF3A6NGB9 AC141257.4-201ENST00000634557 245 ntBASIC17.42■□□□□ 0.38
WIPF3A6NGB9 AC136944.6-201ENST00000634818 245 ntBASIC17.42■□□□□ 0.38
WIPF3A6NGB9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.42■□□□□ 0.38
WIPF3A6NGB9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 PTBP1P-201ENST00000554374 1601 ntBASIC17.41■□□□□ 0.38
WIPF3A6NGB9 SMG8-203ENST00000578922 2178 ntBASIC17.41■□□□□ 0.38
WIPF3A6NGB9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.41■□□□□ 0.38
WIPF3A6NGB9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 HCG4P8-203ENST00000443049 980 ntBASIC17.41■□□□□ 0.38
WIPF3A6NGB9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 SLC25A1P4-201ENST00000567977 778 ntBASIC17.41■□□□□ 0.38
WIPF3A6NGB9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 AC093458.2-201ENST00000623150 629 ntBASIC17.41■□□□□ 0.38
WIPF3A6NGB9 MIR2861-201ENST00000636310 90 ntBASIC17.41■□□□□ 0.38
WIPF3A6NGB9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 AC092720.2-201ENST00000602388 1665 ntBASIC17.41■□□□□ 0.38
WIPF3A6NGB9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.41■□□□□ 0.38
WIPF3A6NGB9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms