Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 AP003041.3-201ENST00000527151 707 ntBASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 AC011558.1-201ENST00000623459 338 ntBASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 AL031432.5-201ENST00000641059 760 ntBASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 KRT8P11-201ENST00000409686 1436 ntBASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3BA6NDS4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 FAM8A6P-201ENST00000407496 1135 ntBASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 PRSS44-201ENST00000515154 1146 ntBASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3BA6NDS4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.55■□□□□ 0.72
TBC1D3BA6NDS4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3BA6NDS4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3BA6NDS4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3BA6NDS4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3BA6NDS4 LINC01006-201ENST00000333319 2292 ntBASIC19.54■□□□□ 0.72
TBC1D3BA6NDS4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3BA6NDS4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.54■□□□□ 0.72
TBC1D3BA6NDS4 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.54■□□□□ 0.72
TBC1D3BA6NDS4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.54■□□□□ 0.72
TBC1D3BA6NDS4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.54■□□□□ 0.72
TBC1D3BA6NDS4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3BA6NDS4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3BA6NDS4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3BA6NDS4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D3BA6NDS4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms