Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 AC005332.8-201ENST00000622750 2735 ntBASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RNF103-CHMP3A0A140T963 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 CROCCP5-201ENST00000436658 830 ntBASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 RAP2CP1-201ENST00000605103 478 ntBASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF103-CHMP3A0A140T963 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF103-CHMP3A0A140T963 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RNF103-CHMP3A0A140T963 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF103-CHMP3A0A140T963 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RNF103-CHMP3A0A140T963 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF103-CHMP3A0A140T963 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RNF103-CHMP3A0A140T963 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF103-CHMP3A0A140T963 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RNF103-CHMP3A0A140T963 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF103-CHMP3A0A140T963 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF103-CHMP3A0A140T963 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF103-CHMP3A0A140T963 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF103-CHMP3A0A140T963 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RNF103-CHMP3A0A140T963 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF103-CHMP3A0A140T963 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
RNF103-CHMP3A0A140T963 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RNF103-CHMP3A0A140T963 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
RNF103-CHMP3A0A140T963 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
RNF103-CHMP3A0A140T963 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
RNF103-CHMP3A0A140T963 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.52■□□□□ 0.55
RNF103-CHMP3A0A140T963 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms