Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 TMEM179-206ENST00000616017 1645 ntBASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 LSM12P1-201ENST00000411836 588 ntBASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-4A0A0B4J246 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 AC026185.1-201ENST00000445748 174 ntBASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 AC023632.3-201ENST00000521633 145 ntBASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-4A0A0B4J246 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms