Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 NUP58P1-201ENST00000502546 1738 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AL049780.3-201ENST00000624612 1583 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 ASNSP1-201ENST00000518311 1939 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 RPL23P2-201ENST00000320371 421 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 RNU6-730P-201ENST00000383954 104 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 MIR765-201ENST00000390226 114 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 RPS3AP3-201ENST00000411933 242 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC004987.3-201ENST00000413879 771 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 RAD23BP2-201ENST00000416003 1207 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC069213.2-201ENST00000420238 366 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AL133173.1-201ENST00000423458 397 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AL590233.1-201ENST00000430017 456 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC073614.1-201ENST00000438690 650 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 RPL22P17-201ENST00000438729 315 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 RN7SL189P-201ENST00000468631 289 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 ACTR3P3-201ENST00000480448 893 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 RN7SL346P-201ENST00000491561 294 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 PGAM1P13-201ENST00000507497 754 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 RPL23AP53-201ENST00000521854 457 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 OR5BC1P-201ENST00000529327 739 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC009977.1-201ENST00000586015 570 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC008782.1-201ENST00000603386 430 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC087763.1-201ENST00000603391 286 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC091834.1-201ENST00000614543 472 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 MIR8069-1-201ENST00000616627 86 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 MIR8069-2-201ENST00000621412 86 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC095031.1-201ENST00000623685 672 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AL596275.2-204ENST00000641628 552 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AL596275.2-206ENST00000641957 626 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC083843.2-201ENST00000568248 6253 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AC008758.3-201ENST00000507003 1829 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AL672167.1-205ENST00000641112 3080 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 ZNF734P-201ENST00000419494 1534 ntBASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCM2LQ9NUG4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 U8.4-201ENST00000363626 134 ntBASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 RNA5SP234-201ENST00000363916 119 ntBASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 RNU6-853P-201ENST00000364306 107 ntBASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 RNVU1-3-201ENST00000364313 161 ntBASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 SNORA16A-201ENST00000384342 137 ntBASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 RNU1-77P-201ENST00000390868 162 ntBASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 SNORD115.1-201ENST00000391109 76 ntBASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 HMGB3P23-201ENST00000414981 585 ntBASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 AC013429.2-201ENST00000418798 781 ntBASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 PSMA6P3-201ENST00000428242 164 ntBASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 CYCSP6-201ENST00000434498 302 ntBASIC4.91□□□□□ -1.62
CCM2LQ9NUG4 VN1R54P-201ENST00000435210 1049 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms