Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SNORA3.3-201ENST00000408712 125 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC048351.1-201ENST00000420064 602 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 CBX1P4-201ENST00000439415 457 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 DNAJC19P1-201ENST00000455312 319 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 USP9YP25-201ENST00000457708 443 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 RPL23AP12-201ENST00000467573 473 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AP000563.1-201ENST00000490865 758 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC091951.3-201ENST00000504093 246 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC113347.3-201ENST00000509113 148 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 RNA5SP164-201ENST00000516533 110 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC010306.1-201ENST00000523223 1117 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 HIGD1AP5-201ENST00000529959 259 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC006960.3-201ENST00000561845 705 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC009094.1-201ENST00000564443 426 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 MIR5708-201ENST00000579723 85 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 MIR4666A-201ENST00000580160 79 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC053481.4-201ENST00000583164 216 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 DUXAP3-201ENST00000603616 594 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC067959.1-201ENST00000604334 379 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC024257.5-201ENST00000612739 531 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 LINC00901.1-201ENST00000617252 152 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC073073.2-201ENST00000609827 2578 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
SIX2Q9NPC8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SIX2Q9NPC8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SIX2Q9NPC8 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
SIX2Q9NPC8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SIX2Q9NPC8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4□□□□□ -1.77
SIX2Q9NPC8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AL049545.1-201ENST00000401856 572 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 AL391417.1-201ENST00000404100 426 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 AL590290.1-201ENST00000405336 380 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4□□□□□ -1.77
SIX2Q9NPC8 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4□□□□□ -1.77
SIX2Q9NPC8 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4□□□□□ -1.77
SIX2Q9NPC8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AC022431.1-201ENST00000450941 438 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 BX248409.1-201ENST00000455497 255 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 PRDX3P4-201ENST00000470828 747 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4□□□□□ -1.77
SIX2Q9NPC8 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AC034244.1-201ENST00000507687 207 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4□□□□□ -1.77
SIX2Q9NPC8 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AC023632.1-201ENST00000518463 375 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4□□□□□ -1.77
SIX2Q9NPC8 PARP1P2-201ENST00000556806 195 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 AC044913.1-201ENST00000557200 430 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AC007224.1-201ENST00000564410 144 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AC005255.1-201ENST00000593748 216 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4□□□□□ -1.77
SIX2Q9NPC8 KLKP1-201ENST00000595979 403 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4□□□□□ -1.77
SIX2Q9NPC8 AL592148.2-201ENST00000612210 372 ntBASIC4□□□□□ -1.77
SIX2Q9NPC8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4□□□□□ -1.77
SIX2Q9NPC8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4□□□□□ -1.77
SIX2Q9NPC8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4□□□□□ -1.77
SIX2Q9NPC8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SIX2Q9NPC8 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4□□□□□ -1.77
SIX2Q9NPC8 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4□□□□□ -1.77
SIX2Q9NPC8 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SIX2Q9NPC8 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SIX2Q9NPC8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX2Q9NPC8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.99□□□□□ -1.77
SIX2Q9NPC8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SIX2Q9NPC8 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SIX2Q9NPC8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.99□□□□□ -1.77
SIX2Q9NPC8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SIX2Q9NPC8 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX2Q9NPC8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
SIX2Q9NPC8 AC018529.3-201ENST00000624212 2254 ntBASIC3.99□□□□□ -1.77
SIX2Q9NPC8 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms