Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC006840.1-201ENST00000623069 542 ntBASIC3.98□□□□□ -1.77
ABCA3Q99758 OR52B1P-201ENST00000316506 909 ntBASIC3.98□□□□□ -1.77
ABCA3Q99758 AL445528.1-201ENST00000426330 420 ntBASIC3.98□□□□□ -1.77
ABCA3Q99758 AC063976.3-201ENST00000426849 329 ntBASIC3.98□□□□□ -1.77
ABCA3Q99758 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.98□□□□□ -1.77
ABCA3Q99758 NPM1P24-201ENST00000428039 894 ntBASIC3.98□□□□□ -1.77
ABCA3Q99758 AC007563.3-201ENST00000433233 371 ntBASIC3.98□□□□□ -1.77
ABCA3Q99758 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.98□□□□□ -1.77
ABCA3Q99758 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.98□□□□□ -1.77
ABCA3Q99758 TRBV12-1-201ENST00000479785 344 ntBASIC3.98□□□□□ -1.77
ABCA3Q99758 AC104687.1-201ENST00000485829 412 ntBASIC3.98□□□□□ -1.77
ABCA3Q99758 RN7SL20P-201ENST00000488827 297 ntBASIC3.98□□□□□ -1.77
ABCA3Q99758 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.98□□□□□ -1.77
ABCA3Q99758 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.98□□□□□ -1.77
ABCA3Q99758 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.98□□□□□ -1.77
ABCA3Q99758 PLCE1P1-201ENST00000622094 305 ntBASIC3.98□□□□□ -1.77
ABCA3Q99758 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
ABCA3Q99758 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.97□□□□□ -1.77
ABCA3Q99758 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ABCA3Q99758 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
ABCA3Q99758 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ABCA3Q99758 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
ABCA3Q99758 SNORA70B-201ENST00000384210 135 ntBASIC3.97□□□□□ -1.77
ABCA3Q99758 HMGB1P18-201ENST00000438801 619 ntBASIC3.97□□□□□ -1.77
ABCA3Q99758 AC010095.1-201ENST00000443543 144 ntBASIC3.97□□□□□ -1.77
ABCA3Q99758 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.97□□□□□ -1.77
ABCA3Q99758 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.97□□□□□ -1.77
ABCA3Q99758 MIR4738-201ENST00000579134 87 ntBASIC3.97□□□□□ -1.77
ABCA3Q99758 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.97□□□□□ -1.77
ABCA3Q99758 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
ABCA3Q99758 AL022311.1-201ENST00000623726 19416 ntBASIC3.97□□□□□ -1.77
ABCA3Q99758 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ABCA3Q99758 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ABCA3Q99758 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ABCA3Q99758 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
ABCA3Q99758 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
ABCA3Q99758 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
ABCA3Q99758 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.96□□□□□ -1.78
ABCA3Q99758 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
ABCA3Q99758 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ABCA3Q99758 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
ABCA3Q99758 MIR9-1-201ENST00000385198 89 ntBASIC3.96□□□□□ -1.78
ABCA3Q99758 AC104297.1-201ENST00000393779 870 ntBASIC3.96□□□□□ -1.78
ABCA3Q99758 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.96□□□□□ -1.78
ABCA3Q99758 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.96□□□□□ -1.78
ABCA3Q99758 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.96□□□□□ -1.78
ABCA3Q99758 HSPE1P6-201ENST00000479457 291 ntBASIC3.96□□□□□ -1.78
ABCA3Q99758 AC090543.2-201ENST00000483963 348 ntBASIC3.96□□□□□ -1.78
ABCA3Q99758 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
ABCA3Q99758 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.96□□□□□ -1.78
ABCA3Q99758 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.96□□□□□ -1.78
ABCA3Q99758 LINC00901.1-201ENST00000617252 152 ntBASIC3.96□□□□□ -1.78
ABCA3Q99758 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ABCA3Q99758 GABRG2-229ENST00000641017 3628 ntBASIC3.96□□□□□ -1.78
ABCA3Q99758 AC009313.2-201ENST00000417893 1941 ntBASIC3.96□□□□□ -1.78
ABCA3Q99758 MTND2P25-201ENST00000449028 610 ntBASIC3.95□□□□□ -1.78
ABCA3Q99758 MTCO3P16-201ENST00000454456 754 ntBASIC3.95□□□□□ -1.78
ABCA3Q99758 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ABCA3Q99758 RN7SKP272-201ENST00000516988 232 ntBASIC3.95□□□□□ -1.78
ABCA3Q99758 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.95□□□□□ -1.78
ABCA3Q99758 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
ABCA3Q99758 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.95□□□□□ -1.78
ABCA3Q99758 uc_338.1-201ENST00000612113 180 ntBASIC3.95□□□□□ -1.78
ABCA3Q99758 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
ABCA3Q99758 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.95□□□□□ -1.78
ABCA3Q99758 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
ABCA3Q99758 ELF2P3-201ENST00000445099 1506 ntBASIC3.95□□□□□ -1.78
ABCA3Q99758 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ABCA3Q99758 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
ABCA3Q99758 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.95□□□□□ -1.78
ABCA3Q99758 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.95□□□□□ -1.78
ABCA3Q99758 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.95□□□□□ -1.78
ABCA3Q99758 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.95□□□□□ -1.78
ABCA3Q99758 AC133473.1-201ENST00000455173 299 ntBASIC3.95□□□□□ -1.78
ABCA3Q99758 AC114967.1-201ENST00000504890 259 ntBASIC3.95□□□□□ -1.78
ABCA3Q99758 AC017037.2-201ENST00000513850 890 ntBASIC3.95□□□□□ -1.78
ABCA3Q99758 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.95□□□□□ -1.78
ABCA3Q99758 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.95□□□□□ -1.78
ABCA3Q99758 OR6R2P-201ENST00000609216 300 ntBASIC3.95□□□□□ -1.78
ABCA3Q99758 AP004607.9-201ENST00000618202 316 ntBASIC3.95□□□□□ -1.78
ABCA3Q99758 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.95□□□□□ -1.78
ABCA3Q99758 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ABCA3Q99758 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
ABCA3Q99758 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.94□□□□□ -1.78
ABCA3Q99758 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.94□□□□□ -1.78
ABCA3Q99758 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.94□□□□□ -1.78
ABCA3Q99758 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ABCA3Q99758 RNA5SP31-201ENST00000411144 127 ntBASIC3.94□□□□□ -1.78
ABCA3Q99758 GLRXP1-201ENST00000423261 334 ntBASIC3.94□□□□□ -1.78
ABCA3Q99758 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.94□□□□□ -1.78
ABCA3Q99758 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.94□□□□□ -1.78
ABCA3Q99758 AC096947.1-201ENST00000603233 470 ntBASIC3.94□□□□□ -1.78
ABCA3Q99758 AC019080.5-201ENST00000624891 757 ntBASIC3.94□□□□□ -1.78
ABCA3Q99758 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ABCA3Q99758 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ABCA3Q99758 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
ABCA3Q99758 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ABCA3Q99758 U3.42-201ENST00000408746 214 ntBASIC3.93□□□□□ -1.78
ABCA3Q99758 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.93□□□□□ -1.78
ABCA3Q99758 RPS20P22-201ENST00000473700 357 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms