Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC012123.2-201ENST00000485809 248 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 AC007318.2-201ENST00000620999 243 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 PLCE1P1-201ENST00000622094 305 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 RN7SKP192-201ENST00000411291 327 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 KATNBL1P2-201ENST00000433311 835 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 OR4K7P-201ENST00000580232 945 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 AC007566.2-201ENST00000603642 413 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 HMGB1P50-201ENST00000605814 607 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 AC073587.1-201ENST00000447093 876 ntBASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 MIR4648-201ENST00000580107 72 ntBASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 AL161781.1-201ENST00000354277 403 ntBASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 RNA5SP289-201ENST00000362332 137 ntBASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 NPM1P24-201ENST00000428039 894 ntBASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 CST9LP2-201ENST00000437612 320 ntBASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 HMGN2P23-201ENST00000456759 269 ntBASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 AP001646.1-201ENST00000527936 915 ntBASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 SNORD39.4-201ENST00000620099 78 ntBASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 HMGB3P12-201ENST00000438745 556 ntBASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 AC091179.1-201ENST00000461606 579 ntBASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 HMGB3P14-201ENST00000494195 599 ntBASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 AP001636.2-201ENST00000525517 696 ntBASIC2.5□□□□□ -2.01
CSMD1Q96PZ7 AC126124.2-201ENST00000413542 321 ntBASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 AL592045.1-201ENST00000429867 352 ntBASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 RNU6-283P-201ENST00000364788 107 ntBASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 HMGB3P18-201ENST00000406327 590 ntBASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 RPL12P26-201ENST00000452430 487 ntBASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 RFPL4AP3-201ENST00000515267 345 ntBASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 RN7SKP82-201ENST00000516786 223 ntBASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 AC106785.3-201ENST00000564064 847 ntBASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 MIR4498-201ENST00000577599 66 ntBASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 ELOCP23-201ENST00000452014 332 ntBASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 SERPINE4P-201ENST00000554978 281 ntBASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 AC015712.3-201ENST00000559380 164 ntBASIC2.49□□□□□ -2.01
CSMD1Q96PZ7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD1Q96PZ7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD1Q96PZ7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD1Q96PZ7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CSMD1Q96PZ7 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD1Q96PZ7 AL049555.1-201ENST00000562834 1933 ntBASIC2.48□□□□□ -2.01
CSMD1Q96PZ7 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD1Q96PZ7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD1Q96PZ7 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD1Q96PZ7 RNU2-52P-201ENST00000410680 190 ntBASIC2.48□□□□□ -2.01
CSMD1Q96PZ7 MTCO1P51-201ENST00000427672 1060 ntBASIC2.48□□□□□ -2.01
CSMD1Q96PZ7 AC087499.2-201ENST00000432861 149 ntBASIC2.48□□□□□ -2.01
CSMD1Q96PZ7 RPL12P18-201ENST00000437175 325 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 201.4 ms