Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 MTCO1P18-201ENST00000455518 1419 ntBASIC3.34□□□□□ -1.88
LRRC58Q96CX6 NMD3P1-201ENST00000439704 1488 ntBASIC3.34□□□□□ -1.88
LRRC58Q96CX6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
LRRC58Q96CX6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
LRRC58Q96CX6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.34□□□□□ -1.88
LRRC58Q96CX6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
LRRC58Q96CX6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
LRRC58Q96CX6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
LRRC58Q96CX6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
LRRC58Q96CX6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 SEC63P2-201ENST00000503863 1939 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 RNA5SP107-201ENST00000411358 122 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC009237.5-201ENST00000414271 501 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 MTND2P15-201ENST00000418575 892 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 PNRC2P1-201ENST00000423940 420 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 RPL23AP82-202ENST00000427528 469 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 OR4F13P-201ENST00000428478 931 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 ETF1P3-201ENST00000430422 1160 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AL133162.1-201ENST00000463228 453 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 CENPBD1P1-201ENST00000464061 469 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC091564.1-201ENST00000464563 479 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 TRBV8-2-201ENST00000475637 270 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC098799.1-201ENST00000504752 800 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 OR4A2P-201ENST00000527276 913 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 MIR5685-201ENST00000579080 79 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC115085.1-201ENST00000588924 229 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AL445493.3-201ENST00000619568 477 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC073592.7-201ENST00000623659 507 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AP003072.4-201ENST00000624580 310 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC007496.3-201ENST00000624987 3443 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AL353743.4-201ENST00000422653 1547 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC007823.1-201ENST00000569932 1566 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 AC046144.1-201ENST00000478559 1853 ntBASIC3.33□□□□□ -1.88
LRRC58Q96CX6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC58Q96CX6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AC073310.1-201ENST00000423226 1033 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AL031736.2-201ENST00000426573 787 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AC018644.1-201ENST00000429934 551 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AL445584.1-201ENST00000431451 330 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 HMGB3P8-201ENST00000449709 577 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 HMGN1P18-201ENST00000457642 277 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 RPL23AP67-201ENST00000465341 474 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AL139099.1-201ENST00000497398 403 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AC107934.2-201ENST00000518653 310 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 RANP9-201ENST00000519957 271 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 OR5AK3P-201ENST00000527486 1297 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AL121594.4-201ENST00000556211 1196 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AC093510.2-201ENST00000562820 896 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AC090751.1-201ENST00000566966 267 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AC067852.4-201ENST00000590314 478 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AC125494.3-201ENST00000602759 455 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AL049634.3-201ENST00000604968 457 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 OR2BH1P-201ENST00000608850 864 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AC069209.1-201ENST00000619282 651 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AL354798.1-201ENST00000622505 329 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 EXOC5P1-201ENST00000510543 1969 ntBASIC3.32□□□□□ -1.88
LRRC58Q96CX6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.32□□□□□ -1.88
LRRC58Q96CX6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms