Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 TPRKBP2-201ENST00000565969 475 ntBASIC5.39□□□□□ -1.55
ERCC4Q92889 AC234778.2-201ENST00000566241 354 ntBASIC5.39□□□□□ -1.55
ERCC4Q92889 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.39□□□□□ -1.55
ERCC4Q92889 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.39□□□□□ -1.55
ERCC4Q92889 AC011447.4-201ENST00000587562 111 ntBASIC5.39□□□□□ -1.55
ERCC4Q92889 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.39□□□□□ -1.55
ERCC4Q92889 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.39□□□□□ -1.55
ERCC4Q92889 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.39□□□□□ -1.55
ERCC4Q92889 AL606834.2-201ENST00000602954 668 ntBASIC5.39□□□□□ -1.55
ERCC4Q92889 ELOCP34-201ENST00000604436 327 ntBASIC5.39□□□□□ -1.55
ERCC4Q92889 AC087783.2-201ENST00000605070 562 ntBASIC5.39□□□□□ -1.55
ERCC4Q92889 AC024941.1-201ENST00000612250 334 ntBASIC5.39□□□□□ -1.55
ERCC4Q92889 AC067931.1-201ENST00000624190 671 ntBASIC5.39□□□□□ -1.55
ERCC4Q92889 AL356596.1-201ENST00000624230 379 ntBASIC5.39□□□□□ -1.55
ERCC4Q92889 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ERCC4Q92889 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ERCC4Q92889 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
ERCC4Q92889 AC025125.1-201ENST00000624743 1922 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC4Q92889 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC4Q92889 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC4Q92889 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.38□□□□□ -1.55
ERCC4Q92889 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC4Q92889 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC4Q92889 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.38□□□□□ -1.55
ERCC4Q92889 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC4Q92889 AC027290.2-201ENST00000623210 18662 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
ERCC4Q92889 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC4Q92889 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC4Q92889 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ERCC4Q92889 RNU5F-6P-201ENST00000362979 116 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 AL080315.1-201ENST00000406055 466 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 RN7SKP213-201ENST00000410746 298 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 RPL23AP27-201ENST00000415161 451 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 IPMKP1-201ENST00000425988 855 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC4Q92889 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.38□□□□□ -1.55
ERCC4Q92889 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC4Q92889 BMS1P19-201ENST00000433925 393 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.38□□□□□ -1.55
ERCC4Q92889 AC092013.1-201ENST00000438795 332 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC4Q92889 ACTR3P2-201ENST00000439585 1257 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC4Q92889 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC4Q92889 AC010733.1-201ENST00000451515 401 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.38□□□□□ -1.55
ERCC4Q92889 RPL37P3-201ENST00000456825 293 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 SNORD42A-201ENST00000459584 64 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 RPL5P30-201ENST00000465511 891 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ERCC4Q92889 AP000797.1-201ENST00000478870 387 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 AC004924.1-201ENST00000480160 781 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 RNU6-347P-201ENST00000516658 105 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC4Q92889 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC4Q92889 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC4Q92889 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC4Q92889 EEF1B2P4-201ENST00000551398 348 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 AC084757.1-201ENST00000559987 490 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.38□□□□□ -1.55
ERCC4Q92889 TVP23CP2-201ENST00000571473 623 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.38□□□□□ -1.55
ERCC4Q92889 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC4Q92889 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.38□□□□□ -1.55
ERCC4Q92889 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.38□□□□□ -1.55
ERCC4Q92889 AC123786.2-201ENST00000603459 275 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 AC243654.2-201ENST00000612843 443 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 U4.5-201ENST00000617137 123 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 U6.42-201ENST00000618440 107 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.38□□□□□ -1.55
ERCC4Q92889 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.38□□□□□ -1.55
ERCC4Q92889 AC108751.5-201ENST00000492880 1336 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 OR4G11P-202ENST00000642116 1414 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC4Q92889 AP000756.2-201ENST00000624168 2567 ntBASIC5.38□□□□□ -1.55
ERCC4Q92889 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC4Q92889 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC4Q92889 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.37□□□□□ -1.55
ERCC4Q92889 AL031985.3-201ENST00000565390 2449 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
ERCC4Q92889 MAPK10-303ENST00000641324 3959 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC4Q92889 SNRPEP3-201ENST00000338402 276 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 SNORA74A-201ENST00000364089 198 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ERCC4Q92889 MIR765-201ENST00000390226 114 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 AL121834.1-202ENST00000404494 277 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 ZNF603P-201ENST00000405613 487 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 RNU6-248P-201ENST00000410720 107 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 OR8G2P-201ENST00000412796 908 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.37□□□□□ -1.55
ERCC4Q92889 RPS17P8-201ENST00000434525 335 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 RPL7P11-201ENST00000437586 658 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 PTMAP6-201ENST00000439110 327 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.37□□□□□ -1.55
ERCC4Q92889 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ERCC4Q92889 AL353572.1-201ENST00000442490 417 ntBASIC5.37□□□□□ -1.55
ERCC4Q92889 NDUFA5P7-201ENST00000452914 242 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms