Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AC112653.1-201ENST00000443851 386 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 RN7SL442P-201ENST00000473804 320 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AC006518.1-201ENST00000541449 943 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AC106785.3-201ENST00000564064 847 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AC018552.3-201ENST00000567416 561 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 LINC02471-203ENST00000641941 4752 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 RPS12P23-201ENST00000419579 400 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AC007563.3-201ENST00000433233 371 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 MIR3186-201ENST00000577404 85 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AC096644.4-201ENST00000563417 2912 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AC021205.2-201ENST00000480069 347 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AL121576.1-201ENST00000556055 276 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 NCAPGP1-201ENST00000505112 1814 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 MIR34A-201ENST00000385130 110 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 NARSP2-201ENST00000518524 679 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AL139174.1-201ENST00000531489 886 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 SNORD67-201ENST00000390833 111 ntBASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 SNORA70.14-201ENST00000516205 110 ntBASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 SULT1C2P2-201ENST00000562517 294 ntBASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 VN1R79P-201ENST00000593540 513 ntBASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AC008126.1-201ENST00000549019 480 ntBASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AC015849.2-201ENST00000605738 409 ntBASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 MTCO1P8-201ENST00000416914 1523 ntBASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 RSL24D1P4-201ENST00000400938 484 ntBASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 RPL23AP22-201ENST00000437556 453 ntBASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 RN7SKP116-201ENST00000516902 319 ntBASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 MIR4435-1-201ENST00000582552 80 ntBASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 AP004607.9-201ENST00000618202 316 ntBASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.12□□□□□ -2.07
ALMS1Q8TCU4 HLFP1-201ENST00000402375 499 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AC019097.1-201ENST00000424783 735 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AC010468.1-201ENST00000461022 817 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AC009159.1-201ENST00000618386 642 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 AC243829.7-201ENST00000633081 225 ntBASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
ALMS1Q8TCU4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms