Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC011626.1-201ENST00000604710 562 ntBASIC4.59□□□□□ -1.67
CPEB3Q8NE35 AL121757.2-201ENST00000611223 313 ntBASIC4.59□□□□□ -1.67
CPEB3Q8NE35 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.59□□□□□ -1.67
CPEB3Q8NE35 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.59□□□□□ -1.67
CPEB3Q8NE35 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.59□□□□□ -1.67
CPEB3Q8NE35 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.59□□□□□ -1.67
CPEB3Q8NE35 AP003122.6-201ENST00000623831 495 ntBASIC4.59□□□□□ -1.67
CPEB3Q8NE35 AC009033.1-201ENST00000624279 431 ntBASIC4.59□□□□□ -1.67
CPEB3Q8NE35 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CPEB3Q8NE35 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CPEB3Q8NE35 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CPEB3Q8NE35 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.59□□□□□ -1.68
CPEB3Q8NE35 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
CPEB3Q8NE35 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CPEB3Q8NE35 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 RNU6-289P-201ENST00000364093 107 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 RN7SKP153-201ENST00000365026 316 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 Y_RNA.409-201ENST00000383990 98 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 RNU6-1009P-201ENST00000390996 107 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 SNORA48.4-201ENST00000391089 134 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 RSU1P2-202ENST00000437884 485 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 ACTR3P2-201ENST00000439585 1257 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC108161.1-201ENST00000461060 402 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC090142.1-201ENST00000465776 462 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 RPS15AP17-201ENST00000470598 390 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 RNU6-488P-201ENST00000515918 99 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 Y_RNA.704-201ENST00000516851 102 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 OR4A12P-201ENST00000530847 918 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 MIR4489-201ENST00000578869 62 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 SNORD39.3-201ENST00000584451 71 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 UBE2V2P2-201ENST00000587677 504 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 HMGN1P30-201ENST00000589286 268 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC008814.1-201ENST00000603797 406 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC007363.1-201ENST00000604736 620 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AL008729.2-201ENST00000606393 473 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC131238.1-201ENST00000617135 328 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 MIR6839-201ENST00000620425 113 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 MIR1321-201ENST00000637766 79 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AC092747.4-201ENST00000620519 1861 ntBASIC4.58□□□□□ -1.68
CPEB3Q8NE35 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CPEB3Q8NE35 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CPEB3Q8NE35 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.57□□□□□ -1.68
CPEB3Q8NE35 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CPEB3Q8NE35 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CPEB3Q8NE35 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.57□□□□□ -1.68
CPEB3Q8NE35 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.57□□□□□ -1.68
CPEB3Q8NE35 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CPEB3Q8NE35 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CPEB3Q8NE35 RPS4XP5-202ENST00000449995 1334 ntBASIC4.57□□□□□ -1.68
CPEB3Q8NE35 OR11H5P-202ENST00000641612 1325 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms