Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 RNA5SP362-201ENST00000516048 118 ntBASIC6.15□□□□□ -1.42
ECM1Q16610 IGLVIV-53-201ENST00000520107 367 ntBASIC6.15□□□□□ -1.42
ECM1Q16610 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.15□□□□□ -1.42
ECM1Q16610 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.15□□□□□ -1.42
ECM1Q16610 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.15□□□□□ -1.42
ECM1Q16610 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.15□□□□□ -1.42
ECM1Q16610 AC011477.5-201ENST00000586571 259 ntBASIC6.15□□□□□ -1.42
ECM1Q16610 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.15□□□□□ -1.42
ECM1Q16610 AL589674.2-201ENST00000604304 337 ntBASIC6.15□□□□□ -1.42
ECM1Q16610 AC135507.2-201ENST00000612443 309 ntBASIC6.15□□□□□ -1.42
ECM1Q16610 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ECM1Q16610 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ECM1Q16610 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
ECM1Q16610 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ECM1Q16610 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ECM1Q16610 MAPK10-338ENST00000641647 3362 ntBASIC6.15□□□□□ -1.43
ECM1Q16610 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.14□□□□□ -1.43
ECM1Q16610 AC007938.2-201ENST00000604666 2634 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ECM1Q16610 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
ECM1Q16610 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ECM1Q16610 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
ECM1Q16610 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ECM1Q16610 SNORA63-201ENST00000363450 132 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 MIR551A-201ENST00000385042 96 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ECM1Q16610 FAT1P1-201ENST00000406588 507 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 RN7SKP32-201ENST00000410167 303 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 RNU2-15P-201ENST00000410692 191 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 RPL31P2-201ENST00000413849 377 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 MRPS21P3-201ENST00000436696 262 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.14□□□□□ -1.43
ECM1Q16610 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.14□□□□□ -1.43
ECM1Q16610 AL356010.1-201ENST00000456364 102 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 AC018638.3-201ENST00000461273 132 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 AL136126.1-201ENST00000473603 402 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 RN7SL174P-201ENST00000475578 289 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.14□□□□□ -1.43
ECM1Q16610 HMGN1P13-201ENST00000505795 138 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 AC111000.3-201ENST00000508057 576 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.14□□□□□ -1.43
ECM1Q16610 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.14□□□□□ -1.43
ECM1Q16610 AC105417.1-201ENST00000514691 285 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 RNA5SP337-201ENST00000517007 109 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 AC090572.1-201ENST00000519251 160 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.14□□□□□ -1.43
ECM1Q16610 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.14□□□□□ -1.43
ECM1Q16610 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.14□□□□□ -1.43
ECM1Q16610 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.14□□□□□ -1.43
ECM1Q16610 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.14□□□□□ -1.43
ECM1Q16610 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.14□□□□□ -1.43
ECM1Q16610 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.14□□□□□ -1.43
ECM1Q16610 AC007687.1-201ENST00000602704 304 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 AC010424.2-201ENST00000607594 443 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 AC000068.2-201ENST00000608816 460 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 AC105429.2-201ENST00000610567 517 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 uc_338.12-201ENST00000616344 181 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 AL354950.2-201ENST00000617939 290 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 AL691477.1-201ENST00000624398 162 ntBASIC6.14□□□□□ -1.43
ECM1Q16610 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ECM1Q16610 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC6.14□□□□□ -1.43
ECM1Q16610 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.14□□□□□ -1.43
ECM1Q16610 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ECM1Q16610 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ECM1Q16610 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ECM1Q16610 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ECM1Q16610 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ECM1Q16610 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
ECM1Q16610 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.14□□□□□ -1.43
ECM1Q16610 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ECM1Q16610 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ECM1Q16610 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.13□□□□□ -1.43
ECM1Q16610 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ECM1Q16610 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
ECM1Q16610 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ECM1Q16610 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ECM1Q16610 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ECM1Q16610 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
ECM1Q16610 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ECM1Q16610 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ECM1Q16610 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ECM1Q16610 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
ECM1Q16610 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ECM1Q16610 RNU4-1-201ENST00000363925 141 ntBASIC6.13□□□□□ -1.43
ECM1Q16610 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.13□□□□□ -1.43
ECM1Q16610 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
ECM1Q16610 RNU6-1158P-201ENST00000391167 107 ntBASIC6.13□□□□□ -1.43
ECM1Q16610 OR4K12P-201ENST00000406538 961 ntBASIC6.13□□□□□ -1.43
ECM1Q16610 RNU2-9P-201ENST00000410194 145 ntBASIC6.13□□□□□ -1.43
ECM1Q16610 RPL36AP36-201ENST00000418616 301 ntBASIC6.13□□□□□ -1.43
ECM1Q16610 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.13□□□□□ -1.43
ECM1Q16610 PPIAP20-201ENST00000449839 135 ntBASIC6.13□□□□□ -1.43
ECM1Q16610 RN7SL184P-201ENST00000488308 297 ntBASIC6.13□□□□□ -1.43
ECM1Q16610 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.13□□□□□ -1.43
ECM1Q16610 IGKV2-19-201ENST00000518132 283 ntBASIC6.13□□□□□ -1.43
ECM1Q16610 AC015720.2-201ENST00000567709 334 ntBASIC6.13□□□□□ -1.43
ECM1Q16610 AC005668.1-201ENST00000571142 476 ntBASIC6.13□□□□□ -1.43
ECM1Q16610 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.13□□□□□ -1.43
ECM1Q16610 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms