Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGCS2P54868 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGCS2P54868 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGCS2P54868 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HMGCS2P54868 RNA5SP197-201ENST00000363357 119 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HMGCS2P54868 RNU6-244P-201ENST00000391028 104 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 AL357075.1-201ENST00000404107 726 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.97□□□□□ -1.77
HMGCS2P54868 AC013410.2-201ENST00000422627 201 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 AL160175.1-201ENST00000428124 247 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.97□□□□□ -1.77
HMGCS2P54868 PTP4A1P3-201ENST00000433661 420 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 AC006028.1-201ENST00000438379 402 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.97□□□□□ -1.77
HMGCS2P54868 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGCS2P54868 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGCS2P54868 AC025459.1-201ENST00000504072 156 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 AC021678.1-201ENST00000505195 936 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGCS2P54868 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGCS2P54868 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGCS2P54868 AP003102.1-201ENST00000525638 661 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.97□□□□□ -1.77
HMGCS2P54868 AC122134.1-202ENST00000569111 1201 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGCS2P54868 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.97□□□□□ -1.77
HMGCS2P54868 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HMGCS2P54868 DNAJC19P3-201ENST00000594491 331 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 AL137843.1-201ENST00000605078 385 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 AC135507.2-201ENST00000612443 309 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 MIR8084-201ENST00000614105 89 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGCS2P54868 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGCS2P54868 AC119744.1-201ENST00000454746 1715 ntBASIC3.97□□□□□ -1.77
HMGCS2P54868 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGCS2P54868 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.97□□□□□ -1.77
HMGCS2P54868 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGCS2P54868 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HMGCS2P54868 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HMGCS2P54868 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.96□□□□□ -1.77
HMGCS2P54868 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.96□□□□□ -1.78
HMGCS2P54868 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
HMGCS2P54868 OR10J6P-201ENST00000289731 930 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HMGCS2P54868 RNU6-796P-201ENST00000391086 107 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 RSL24D1P1-201ENST00000404972 493 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.96□□□□□ -1.78
HMGCS2P54868 AC013404.1-201ENST00000413068 249 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.96□□□□□ -1.78
HMGCS2P54868 OR2X1P-201ENST00000421144 687 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.96□□□□□ -1.78
HMGCS2P54868 MOB1AP1-201ENST00000430903 535 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 AL158053.1-201ENST00000441503 453 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 YWHAQP9-201ENST00000445891 512 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 RPL7P31-201ENST00000450192 724 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.96□□□□□ -1.78
HMGCS2P54868 RPL7P38-201ENST00000488396 739 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.96□□□□□ -1.78
HMGCS2P54868 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.96□□□□□ -1.78
HMGCS2P54868 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.96□□□□□ -1.78
HMGCS2P54868 IGHV3-32-201ENST00000519182 355 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 OR4R3P-201ENST00000525084 838 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HMGCS2P54868 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.96□□□□□ -1.78
HMGCS2P54868 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.96□□□□□ -1.78
HMGCS2P54868 MIR5004-201ENST00000579078 107 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 AC006557.5-201ENST00000603126 811 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 BNIP3P11-201ENST00000603878 563 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.96□□□□□ -1.78
HMGCS2P54868 AL162713.1-201ENST00000604480 262 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 SUMO2P14-201ENST00000604488 293 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HMGCS2P54868 AL158196.1-201ENST00000616786 434 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.96□□□□□ -1.78
HMGCS2P54868 AC068880.4-201ENST00000623082 495 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HMGCS2P54868 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HMGCS2P54868 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
HMGCS2P54868 AC073073.2-201ENST00000609827 2578 ntBASIC3.96□□□□□ -1.78
HMGCS2P54868 MAPK10-253ENST00000641010 4072 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS2P54868 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS2P54868 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
HMGCS2P54868 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGCS2P54868 AC006504.1-201ENST00000562493 3666 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS2P54868 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS2P54868 GCNT6-201ENST00000379591 934 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 RNU6-1005P-201ENST00000384519 107 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGCS2P54868 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS2P54868 AL035405.1-201ENST00000400795 710 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 HMGN1P24-201ENST00000412282 298 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 XKRYP4-201ENST00000414395 483 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 AC063979.1-201ENST00000415539 377 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGCS2P54868 AL606495.1-201ENST00000422100 813 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms