Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX2P48431 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.19□□□□□ -1.74
SOX2P48431 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX2P48431 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX2P48431 FKBP1BP1-201ENST00000553366 325 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.19□□□□□ -1.74
SOX2P48431 LARP7P2-201ENST00000575306 125 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.19□□□□□ -1.74
SOX2P48431 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX2P48431 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.19□□□□□ -1.74
SOX2P48431 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX2P48431 AC015871.2-201ENST00000603605 948 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AC006566.1-201ENST00000608943 513 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AC108747.1-201ENST00000609508 535 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AL589743.7-201ENST00000612637 233 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AC092794.1-201ENST00000612734 582 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX2P48431 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX2P48431 SNORA17.5-201ENST00000630429 132 ntBASIC4.19□□□□□ -1.74
SOX2P48431 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX2P48431 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX2P48431 LINC01109-201ENST00000603837 3081 ntBASIC4.19□□□□□ -1.74
SOX2P48431 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX2P48431 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX2P48431 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX2P48431 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SOX2P48431 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SOX2P48431 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
SOX2P48431 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SOX2P48431 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX2P48431 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 SNURFL-201ENST00000309296 343 ntBASIC4.18□□□□□ -1.74
SOX2P48431 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.18□□□□□ -1.74
SOX2P48431 RNU6-777P-201ENST00000364265 104 ntBASIC4.18□□□□□ -1.74
SOX2P48431 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 Y_RNA.516-201ENST00000384541 124 ntBASIC4.18□□□□□ -1.74
SOX2P48431 RNU6-146P-201ENST00000384602 108 ntBASIC4.18□□□□□ -1.74
SOX2P48431 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 AC016769.3-201ENST00000396562 315 ntBASIC4.18□□□□□ -1.74
SOX2P48431 DHFRP6-201ENST00000401776 268 ntBASIC4.18□□□□□ -1.74
SOX2P48431 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SOX2P48431 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.18□□□□□ -1.74
SOX2P48431 RNA5SP345-201ENST00000410646 108 ntBASIC4.18□□□□□ -1.74
SOX2P48431 HMGN1P14-201ENST00000412459 517 ntBASIC4.18□□□□□ -1.74
SOX2P48431 FCF1P9-201ENST00000412546 282 ntBASIC4.18□□□□□ -1.74
SOX2P48431 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.18□□□□□ -1.74
SOX2P48431 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.18□□□□□ -1.74
SOX2P48431 FNDC3CP-201ENST00000420795 1155 ntBASIC4.18□□□□□ -1.74
SOX2P48431 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX2P48431 AC104843.2-201ENST00000427666 297 ntBASIC4.18□□□□□ -1.74
SOX2P48431 AC079807.1-201ENST00000429993 481 ntBASIC4.18□□□□□ -1.74
SOX2P48431 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX2P48431 CEACAMP1-201ENST00000434624 1035 ntBASIC4.18□□□□□ -1.74
SOX2P48431 RHOT1P3-201ENST00000436571 331 ntBASIC4.18□□□□□ -1.74
SOX2P48431 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.18□□□□□ -1.74
SOX2P48431 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.18□□□□□ -1.74
SOX2P48431 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.18□□□□□ -1.74
SOX2P48431 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.18□□□□□ -1.74
SOX2P48431 RN7SL319P-201ENST00000480656 221 ntBASIC4.18□□□□□ -1.74
SOX2P48431 UBA52P7-201ENST00000486088 380 ntBASIC4.18□□□□□ -1.74
SOX2P48431 RN7SL97P-201ENST00000486780 299 ntBASIC4.18□□□□□ -1.74
SOX2P48431 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.18□□□□□ -1.74
SOX2P48431 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.18□□□□□ -1.74
SOX2P48431 MTND2P33-201ENST00000506452 1031 ntBASIC4.18□□□□□ -1.74
SOX2P48431 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX2P48431 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX2P48431 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX2P48431 AC104057.1-201ENST00000515547 497 ntBASIC4.18□□□□□ -1.74
SOX2P48431 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.18□□□□□ -1.74
SOX2P48431 AP002748.2-201ENST00000528671 348 ntBASIC4.18□□□□□ -1.74
SOX2P48431 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX2P48431 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX2P48431 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX2P48431 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX2P48431 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.18□□□□□ -1.74
SOX2P48431 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX2P48431 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX2P48431 MIR4528-201ENST00000577763 90 ntBASIC4.18□□□□□ -1.74
SOX2P48431 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX2P48431 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX2P48431 AC090948.2-201ENST00000607363 564 ntBASIC4.18□□□□□ -1.74
SOX2P48431 AC080013.4-201ENST00000607624 649 ntBASIC4.18□□□□□ -1.74
SOX2P48431 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 AL627230.1-201ENST00000613077 211 ntBASIC4.18□□□□□ -1.74
SOX2P48431 uc_338.18-201ENST00000615451 175 ntBASIC4.18□□□□□ -1.74
SOX2P48431 AC025588.4-201ENST00000615802 908 ntBASIC4.18□□□□□ -1.74
SOX2P48431 AL591926.8-201ENST00000616876 211 ntBASIC4.18□□□□□ -1.74
SOX2P48431 BMS1P21-201ENST00000634565 365 ntBASIC4.18□□□□□ -1.74
SOX2P48431 CRYM-AS1-204ENST00000637983 556 ntBASIC4.18□□□□□ -1.74
SOX2P48431 AC068137.3-201ENST00000639191 341 ntBASIC4.18□□□□□ -1.74
SOX2P48431 AC073869.6-201ENST00000640656 341 ntBASIC4.18□□□□□ -1.74
SOX2P48431 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX2P48431 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms