Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.34□□□□□ -1.87
RPA3P35244 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.34□□□□□ -1.87
RPA3P35244 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RPA3P35244 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.34□□□□□ -1.87
RPA3P35244 ZNF542P-204ENST00000482727 1305 ntBASIC3.34□□□□□ -1.87
RPA3P35244 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.88
RPA3P35244 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RPA3P35244 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
RPA3P35244 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.33□□□□□ -1.88
RPA3P35244 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPA3P35244 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RPA3P35244 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.33□□□□□ -1.88
RPA3P35244 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
RPA3P35244 RNU4-35P-201ENST00000362588 141 ntBASIC3.33□□□□□ -1.88
RPA3P35244 RNU4-23P-201ENST00000362839 140 ntBASIC3.33□□□□□ -1.88
RPA3P35244 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.33□□□□□ -1.88
RPA3P35244 RNU6-452P-201ENST00000384406 107 ntBASIC3.33□□□□□ -1.88
RPA3P35244 MIR153-1-201ENST00000384914 90 ntBASIC3.33□□□□□ -1.88
RPA3P35244 RNA5SP44-201ENST00000410446 133 ntBASIC3.33□□□□□ -1.88
RPA3P35244 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPA3P35244 AC245052.5-201ENST00000416320 649 ntBASIC3.33□□□□□ -1.88
RPA3P35244 RPL31P45-201ENST00000419532 356 ntBASIC3.33□□□□□ -1.88
RPA3P35244 RPL37P1-201ENST00000432310 284 ntBASIC3.33□□□□□ -1.88
RPA3P35244 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.33□□□□□ -1.88
RPA3P35244 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.33□□□□□ -1.88
RPA3P35244 AC115115.1-201ENST00000449927 248 ntBASIC3.33□□□□□ -1.88
RPA3P35244 RBMY2UP-201ENST00000453474 324 ntBASIC3.33□□□□□ -1.88
RPA3P35244 AC112198.1-201ENST00000505369 1220 ntBASIC3.33□□□□□ -1.88
RPA3P35244 AC016550.3-201ENST00000515706 767 ntBASIC3.33□□□□□ -1.88
RPA3P35244 RNU6-491P-201ENST00000516099 110 ntBASIC3.33□□□□□ -1.88
RPA3P35244 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPA3P35244 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.33□□□□□ -1.88
RPA3P35244 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.33□□□□□ -1.88
RPA3P35244 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.33□□□□□ -1.88
RPA3P35244 MIR4429-201ENST00000580105 73 ntBASIC3.33□□□□□ -1.88
RPA3P35244 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.33□□□□□ -1.88
RPA3P35244 AC008739.3-201ENST00000603262 127 ntBASIC3.33□□□□□ -1.88
RPA3P35244 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.33□□□□□ -1.88
RPA3P35244 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.33□□□□□ -1.88
RPA3P35244 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPA3P35244 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.33□□□□□ -1.88
RPA3P35244 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.33□□□□□ -1.88
RPA3P35244 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPA3P35244 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RPA3P35244 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.32□□□□□ -1.88
RPA3P35244 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPA3P35244 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPA3P35244 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.32□□□□□ -1.88
RPA3P35244 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPA3P35244 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.32□□□□□ -1.88
RPA3P35244 RNU6-152P-201ENST00000384037 107 ntBASIC3.32□□□□□ -1.88
RPA3P35244 MIR670-201ENST00000390142 98 ntBASIC3.32□□□□□ -1.88
RPA3P35244 SNORD17-201ENST00000390930 237 ntBASIC3.32□□□□□ -1.88
RPA3P35244 RPL21P3-201ENST00000395517 478 ntBASIC3.32□□□□□ -1.88
RPA3P35244 CST9LP2-201ENST00000437612 320 ntBASIC3.32□□□□□ -1.88
RPA3P35244 CYCSP35-201ENST00000451978 304 ntBASIC3.32□□□□□ -1.88
RPA3P35244 AC146507.2-201ENST00000460608 476 ntBASIC3.32□□□□□ -1.88
RPA3P35244 AC107398.1-201ENST00000486904 505 ntBASIC3.32□□□□□ -1.88
RPA3P35244 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPA3P35244 FCF1P8-201ENST00000510322 597 ntBASIC3.32□□□□□ -1.88
RPA3P35244 RNA5SP217-201ENST00000515959 91 ntBASIC3.32□□□□□ -1.88
RPA3P35244 AC008676.3-201ENST00000521237 435 ntBASIC3.32□□□□□ -1.88
RPA3P35244 AC093331.1-201ENST00000521474 169 ntBASIC3.32□□□□□ -1.88
RPA3P35244 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.32□□□□□ -1.88
RPA3P35244 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.32□□□□□ -1.88
RPA3P35244 AC009268.1-201ENST00000561352 1203 ntBASIC3.32□□□□□ -1.88
RPA3P35244 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.32□□□□□ -1.88
RPA3P35244 ZNF92P3-201ENST00000596594 954 ntBASIC3.32□□□□□ -1.88
RPA3P35244 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.32□□□□□ -1.88
RPA3P35244 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.32□□□□□ -1.88
RPA3P35244 AP004607.9-201ENST00000618202 316 ntBASIC3.32□□□□□ -1.88
RPA3P35244 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPA3P35244 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.32□□□□□ -1.88
RPA3P35244 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPA3P35244 CR383658.2-201ENST00000547576 1525 ntBASIC3.32□□□□□ -1.88
RPA3P35244 MTND5P27-201ENST00000428871 1720 ntBASIC3.32□□□□□ -1.88
RPA3P35244 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPA3P35244 AC025125.1-201ENST00000624743 1922 ntBASIC3.32□□□□□ -1.88
RPA3P35244 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPA3P35244 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPA3P35244 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPA3P35244 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPA3P35244 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPA3P35244 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPA3P35244 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPA3P35244 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
RPA3P35244 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RPA3P35244 RNA5SP119-201ENST00000362715 117 ntBASIC3.31□□□□□ -1.88
RPA3P35244 RNA5SP391-201ENST00000363456 119 ntBASIC3.31□□□□□ -1.88
RPA3P35244 U3.6-201ENST00000363622 211 ntBASIC3.31□□□□□ -1.88
RPA3P35244 AC234772.1-201ENST00000377927 937 ntBASIC3.31□□□□□ -1.88
RPA3P35244 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.31□□□□□ -1.88
RPA3P35244 AC007899.1-201ENST00000412776 775 ntBASIC3.31□□□□□ -1.88
RPA3P35244 LINC01881-201ENST00000416103 412 ntBASIC3.31□□□□□ -1.88
RPA3P35244 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.31□□□□□ -1.88
RPA3P35244 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.31□□□□□ -1.88
RPA3P35244 ARL5AP2-201ENST00000444698 533 ntBASIC3.31□□□□□ -1.88
RPA3P35244 Z99127.3-201ENST00000448158 395 ntBASIC3.31□□□□□ -1.88
RPA3P35244 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.31□□□□□ -1.88
RPA3P35244 RPS20P32-201ENST00000456044 356 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms