Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.44□□□□□ -1.38
VARSP26640 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.44□□□□□ -1.38
VARSP26640 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.44□□□□□ -1.38
VARSP26640 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.44□□□□□ -1.38
VARSP26640 HIGD1AP11-201ENST00000438361 280 ntBASIC6.44□□□□□ -1.38
VARSP26640 AC083855.1-201ENST00000440041 258 ntBASIC6.44□□□□□ -1.38
VARSP26640 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.44□□□□□ -1.38
VARSP26640 RPS23P3-201ENST00000470993 430 ntBASIC6.44□□□□□ -1.38
VARSP26640 MED28P2-201ENST00000475771 317 ntBASIC6.44□□□□□ -1.38
VARSP26640 AC021382.1-201ENST00000483523 359 ntBASIC6.44□□□□□ -1.38
VARSP26640 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.44□□□□□ -1.38
VARSP26640 AC104806.1-201ENST00000508720 308 ntBASIC6.44□□□□□ -1.38
VARSP26640 AC021146.3-201ENST00000511911 260 ntBASIC6.44□□□□□ -1.38
VARSP26640 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.44□□□□□ -1.38
VARSP26640 TBCAP3-201ENST00000512475 312 ntBASIC6.44□□□□□ -1.38
VARSP26640 RNA5SP384-201ENST00000516615 116 ntBASIC6.44□□□□□ -1.38
VARSP26640 RN7SKP96-201ENST00000516948 297 ntBASIC6.44□□□□□ -1.38
VARSP26640 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.44□□□□□ -1.38
VARSP26640 IGLV3-6-201ENST00000523937 250 ntBASIC6.44□□□□□ -1.38
VARSP26640 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.44□□□□□ -1.38
VARSP26640 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.44□□□□□ -1.38
VARSP26640 AP001858.2-201ENST00000536213 601 ntBASIC6.44□□□□□ -1.38
VARSP26640 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.44□□□□□ -1.38
VARSP26640 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.44□□□□□ -1.38
VARSP26640 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.44□□□□□ -1.38
VARSP26640 AL512329.2-201ENST00000607350 548 ntBASIC6.44□□□□□ -1.38
VARSP26640 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 AL049794.2-201ENST00000616301 365 ntBASIC6.44□□□□□ -1.38
VARSP26640 CYP3A51P-201ENST00000633513 256 ntBASIC6.44□□□□□ -1.38
VARSP26640 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.44□□□□□ -1.38
VARSP26640 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.44□□□□□ -1.38
VARSP26640 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
VARSP26640 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.44□□□□□ -1.38
VARSP26640 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.44□□□□□ -1.38
VARSP26640 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 AC007842.1-201ENST00000597336 2039 ntBASIC6.43□□□□□ -1.38
VARSP26640 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.43□□□□□ -1.38
VARSP26640 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VARSP26640 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARSP26640 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARSP26640 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
VARSP26640 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARSP26640 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARSP26640 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
VARSP26640 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VARSP26640 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VARSP26640 RNA5SP188-201ENST00000362916 129 ntBASIC6.43□□□□□ -1.38
VARSP26640 SNORD14.1-201ENST00000365609 90 ntBASIC6.43□□□□□ -1.38
VARSP26640 Y_RNA.376-201ENST00000365638 108 ntBASIC6.43□□□□□ -1.38
VARSP26640 RNU6-746P-201ENST00000384112 109 ntBASIC6.43□□□□□ -1.38
VARSP26640 RNU6-278P-201ENST00000390945 109 ntBASIC6.43□□□□□ -1.38
VARSP26640 U3.25-201ENST00000391209 220 ntBASIC6.43□□□□□ -1.38
VARSP26640 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.43□□□□□ -1.38
VARSP26640 MORN2-203ENST00000409131 544 ntTSL 5 BASIC6.43□□□□□ -1.38
VARSP26640 RNU4-46P-201ENST00000410818 138 ntBASIC6.43□□□□□ -1.38
VARSP26640 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARSP26640 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.43□□□□□ -1.38
VARSP26640 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.43□□□□□ -1.38
VARSP26640 AL121871.1-201ENST00000443413 436 ntBASIC6.43□□□□□ -1.38
VARSP26640 AC133473.1-201ENST00000455173 299 ntBASIC6.43□□□□□ -1.38
VARSP26640 TRBV26-201ENST00000456572 344 ntBASIC6.43□□□□□ -1.38
VARSP26640 SCARNA18-201ENST00000459004 134 ntBASIC6.43□□□□□ -1.38
VARSP26640 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.43□□□□□ -1.38
VARSP26640 SNRPCP3-201ENST00000474888 476 ntBASIC6.43□□□□□ -1.38
VARSP26640 RN7SL165P-201ENST00000477476 291 ntBASIC6.43□□□□□ -1.38
VARSP26640 FO393415.2-201ENST00000480085 343 ntBASIC6.43□□□□□ -1.38
VARSP26640 RNA5SP473-201ENST00000516402 125 ntBASIC6.43□□□□□ -1.38
VARSP26640 Y_RNA.715-201ENST00000517082 110 ntBASIC6.43□□□□□ -1.38
VARSP26640 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.43□□□□□ -1.38
VARSP26640 HSPE1P20-201ENST00000538133 289 ntBASIC6.43□□□□□ -1.38
VARSP26640 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.43□□□□□ -1.38
VARSP26640 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
VARSP26640 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC6.43□□□□□ -1.38
VARSP26640 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.43□□□□□ -1.38
VARSP26640 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.43□□□□□ -1.38
VARSP26640 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.43□□□□□ -1.38
VARSP26640 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.43□□□□□ -1.38
VARSP26640 AC090615.1-201ENST00000577519 154 ntBASIC6.43□□□□□ -1.38
VARSP26640 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
VARSP26640 U1.31-201ENST00000620022 160 ntBASIC6.43□□□□□ -1.38
VARSP26640 AC073593.1-201ENST00000624500 411 ntBASIC6.43□□□□□ -1.38
VARSP26640 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARSP26640 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.43□□□□□ -1.38
VARSP26640 THAP12P4-201ENST00000528321 2266 ntBASIC6.43□□□□□ -1.38
VARSP26640 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
VARSP26640 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.43□□□□□ -1.38
VARSP26640 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARSP26640 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARSP26640 AC093775.1-201ENST00000624154 1868 ntBASIC6.43□□□□□ -1.38
VARSP26640 AC009779.8-201ENST00000641684 4384 ntBASIC6.43□□□□□ -1.38
VARSP26640 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARSP26640 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VARSP26640 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
VARSP26640 AC107081.3-201ENST00000612715 2034 ntBASIC6.42□□□□□ -1.38
VARSP26640 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms