Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MIR432-201ENST00000606207 94 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AP004247.3-201ENST00000608682 624 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AC063944.3-201ENST00000609969 533 ntBASIC4.04□□□□□ -1.76
CDH3P22223 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH3P22223 AC243756.2-201ENST00000618406 463 ntBASIC4.04□□□□□ -1.76
CDH3P22223 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH3P22223 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CDH3P22223 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDH3P22223 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH3P22223 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH3P22223 AL355578.1-201ENST00000607405 1328 ntBASIC4.03□□□□□ -1.76
CDH3P22223 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH3P22223 SPRR2C-201ENST00000290702 219 ntBASIC4.03□□□□□ -1.76
CDH3P22223 RNU1-13P-201ENST00000384499 162 ntBASIC4.03□□□□□ -1.76
CDH3P22223 SFR1P1-201ENST00000403720 688 ntBASIC4.03□□□□□ -1.76
CDH3P22223 RNU6-628P-201ENST00000410675 107 ntBASIC4.03□□□□□ -1.76
CDH3P22223 RPS3AP25-201ENST00000411660 793 ntBASIC4.03□□□□□ -1.76
CDH3P22223 SSR1P2-201ENST00000415208 787 ntBASIC4.03□□□□□ -1.76
CDH3P22223 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.03□□□□□ -1.76
CDH3P22223 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH3P22223 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH3P22223 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH3P22223 NANOGP2-201ENST00000435391 727 ntBASIC4.03□□□□□ -1.76
CDH3P22223 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH3P22223 RAB11AP1-201ENST00000442978 646 ntBASIC4.03□□□□□ -1.76
CDH3P22223 HMGB3P6-201ENST00000444896 598 ntBASIC4.03□□□□□ -1.76
CDH3P22223 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH3P22223 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH3P22223 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH3P22223 PTGES3P5-201ENST00000455109 434 ntBASIC4.03□□□□□ -1.76
CDH3P22223 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH3P22223 FTH1P2-201ENST00000466086 412 ntBASIC4.03□□□□□ -1.76
CDH3P22223 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDH3P22223 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH3P22223 AC110792.2-201ENST00000510278 224 ntBASIC4.03□□□□□ -1.76
CDH3P22223 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH3P22223 RN7SKP265-201ENST00000516448 223 ntBASIC4.03□□□□□ -1.76
CDH3P22223 NARSP2-201ENST00000518524 679 ntBASIC4.03□□□□□ -1.76
CDH3P22223 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH3P22223 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.03□□□□□ -1.76
CDH3P22223 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH3P22223 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH3P22223 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH3P22223 AC092747.2-201ENST00000545069 983 ntBASIC4.03□□□□□ -1.76
CDH3P22223 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH3P22223 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH3P22223 RN7SL600P-201ENST00000581811 299 ntBASIC4.03□□□□□ -1.76
CDH3P22223 BNIP3P38-201ENST00000601117 544 ntBASIC4.03□□□□□ -1.76
CDH3P22223 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH3P22223 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH3P22223 AL158163.2-201ENST00000619110 700 ntBASIC4.03□□□□□ -1.76
CDH3P22223 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CDH3P22223 AC010608.2-201ENST00000624830 470 ntBASIC4.03□□□□□ -1.76
CDH3P22223 AC000367.1-201ENST00000452711 1766 ntBASIC4.03□□□□□ -1.76
CDH3P22223 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH3P22223 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CDH3P22223 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CDH3P22223 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDH3P22223 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.02□□□□□ -1.77
CDH3P22223 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CDH3P22223 RNU6-707P-201ENST00000364647 95 ntBASIC4.02□□□□□ -1.77
CDH3P22223 RNU6-356P-201ENST00000384140 107 ntBASIC4.02□□□□□ -1.77
CDH3P22223 RN7SKP33-201ENST00000410942 340 ntBASIC4.02□□□□□ -1.77
CDH3P22223 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH3P22223 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH3P22223 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH3P22223 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH3P22223 AL365396.1-201ENST00000430854 671 ntBASIC4.02□□□□□ -1.77
CDH3P22223 MOB1AP1-201ENST00000430903 535 ntBASIC4.02□□□□□ -1.77
CDH3P22223 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH3P22223 AL035246.1-201ENST00000433554 1255 ntBASIC4.02□□□□□ -1.77
CDH3P22223 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH3P22223 AC004865.1-201ENST00000442276 1003 ntBASIC4.02□□□□□ -1.77
CDH3P22223 HSFY6P-201ENST00000445573 403 ntBASIC4.02□□□□□ -1.77
CDH3P22223 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH3P22223 AL589880.1-201ENST00000448271 287 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC233982.1-201ENST00000451247 436 ntBASIC4.02□□□□□ -1.77
CDH3P22223 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC096992.1-201ENST00000459808 709 ntBASIC4.02□□□□□ -1.77
CDH3P22223 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH3P22223 GAPDHP39-201ENST00000481866 979 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC126121.1-201ENST00000482313 553 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC069528.1-202ENST00000482888 637 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH3P22223 RN7SL604P-201ENST00000492589 296 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC108145.1-201ENST00000503770 153 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH3P22223 AC025554.1-201ENST00000505641 188 ntBASIC4.02□□□□□ -1.77
CDH3P22223 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH3P22223 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH3P22223 AC109458.1-201ENST00000508858 316 ntBASIC4.02□□□□□ -1.77
CDH3P22223 RNA5SP143-201ENST00000516936 115 ntBASIC4.02□□□□□ -1.77
CDH3P22223 RN7SKP234-201ENST00000517173 224 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH3P22223 AF279873.1-201ENST00000523393 313 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AP004242.1-201ENST00000533701 349 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH3P22223 AGGF1P8-201ENST00000562979 1000 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH3P22223 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms