Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RFPL4AP5-201ENST00000514977 504 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 HMGN1P28-201ENST00000521340 364 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AL133399.1-201ENST00000527476 298 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 PTP4A1P6-201ENST00000531034 478 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AL133271.1-201ENST00000538229 291 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC135001.1-201ENST00000544546 283 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 MIR5583-1-201ENST00000580941 59 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 SNORA74.4-201ENST00000607595 199 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC010378.1-201ENST00000619270 362 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AL161637.1-201ENST00000622380 412 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AL445363.3-201ENST00000623080 671 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 API5P2-201ENST00000397055 1498 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC090337.1-201ENST00000579651 2074 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC140479.2-201ENST00000421567 3130 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 ZNF807-201ENST00000328088 1707 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 Y_RNA.5-201ENST00000362334 102 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 Y_RNA.47-201ENST00000362697 108 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 RNU6-960P-201ENST00000364056 120 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 ARSFP1-201ENST00000398758 477 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC114491.1-201ENST00000416095 246 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 PDSS1P1-201ENST00000422953 1114 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC018865.2-201ENST00000423631 129 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AL160004.2-201ENST00000432935 350 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC092967.1-201ENST00000449016 481 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC010733.1-201ENST00000451515 401 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 VPS25P1-201ENST00000455691 508 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 OR9A1P-202ENST00000484361 945 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 HIGD1AP13-201ENST00000509878 289 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 RNU6-64P-201ENST00000517119 105 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 RNA5SP400-201ENST00000517155 111 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC124068.1-201ENST00000563131 678 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC024619.4-201ENST00000580924 316 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC025588.3-201ENST00000604182 274 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 PISRT1.1-201ENST00000616930 107 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC103705.1-201ENST00000619013 241 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AL669831.3-213ENST00000636676 183 ntBASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHGA11Q9Y5H2 AC087516.1-201ENST00000561236 2428 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AL355834.1-201ENST00000556602 3965 ntBASIC6.11□□□□□ -1.43
PCDHGA11Q9Y5H2 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms