Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MIR4715-201ENST00000584117 79 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AL390838.2-201ENST00000602394 274 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC091805.2-201ENST00000603848 235 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC112220.3-201ENST00000605502 502 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC068276.1-201ENST00000605793 379 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC090186.1-201ENST00000605991 572 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC126118.1-201ENST00000607744 628 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC109347.2-201ENST00000610220 349 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC005962.2-201ENST00000611427 652 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC243654.2-201ENST00000612843 443 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AL139811.1-201ENST00000424779 2299 ntBASIC5.46□□□□□ -1.53
CTDP1Q9Y5B0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
CTDP1Q9Y5B0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CTDP1Q9Y5B0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 Y_RNA.408-201ENST00000383987 102 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 RNU6-1042P-201ENST00000384204 107 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 ZNF603P-201ENST00000405613 487 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AL133264.1-201ENST00000407157 562 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 RPL31P52-201ENST00000407532 367 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AC140479.3-201ENST00000418944 1126 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AC004448.2-201ENST00000422360 586 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 RPL18P10-201ENST00000425606 538 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 RPS24P8-201ENST00000431490 402 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 RPL34P6-201ENST00000432390 345 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AC079168.2-201ENST00000453977 416 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 TRBV8-2-201ENST00000475637 270 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 ACTG1P13-201ENST00000486987 1043 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 MTAPP1-201ENST00000489154 819 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AC006499.5-201ENST00000505037 514 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 GTF2IP8-201ENST00000560687 584 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AC040958.1-201ENST00000561102 201 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 MIR4277-201ENST00000578298 84 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 NDUFA8P1-201ENST00000605525 367 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AL109618.2-201ENST00000605527 211 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AC024941.1-201ENST00000612250 334 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 MIR6758-201ENST00000620653 63 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 THAP12P5-201ENST00000405864 2275 ntBASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
CTDP1Q9Y5B0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 ZNF137P-201ENST00000456718 1920 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 OR52B1P-201ENST00000316506 909 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 SNORA75-201ENST00000384158 137 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 MIR16-1-201ENST00000385271 89 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AC007738.1-201ENST00000413892 348 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 UQCRBP1-201ENST00000421129 336 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 EIF1P1-201ENST00000421436 341 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AL009174.1-201ENST00000426577 416 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AL139415.2-201ENST00000431968 163 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 RPL21P133-201ENST00000443666 476 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms